Factsheet for GSMUA_Achr6P33860_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03540_001	Banana	cytosol	75.76	78.12
GSMUA_Achr1P21160_001	Banana	cytosol	69.7	73.72
VIT_13s0019g03170.t01	Wine grape	cytosol	70.3	72.96
GSMUA_Achr9P00510_001	Banana	cytosol	68.48	71.97
GSMUA_Achr7P14910_001	Banana	cytosol	61.21	60.12
GSMUA_Achr5P17640_001	Banana	cytosol	32.12	59.55
GSMUA_Achr8P00290_001	Banana	cytosol	50.91	57.93
GSMUA_Achr1P21150_001	Banana	cytosol	48.48	49.38
EES02533	Sorghum	cytosol	41.82	41.82
TraesCS3B01G048700.1	Wheat	cytosol	41.21	41.46
TraesCS3A01G035400.1	Wheat	cytosol	41.21	41.21
KRH00090	Soybean	cytosol	41.82	40.35
KRH62434	Soybean	cytosol	38.18	40.13
HORVU3Hr1G006930.1	Barley	cytosol	40.0	40.0
Os01t0135900-02	Rice	plasma membrane	40.0	39.76
KRH49235	Soybean	cytosol	37.58	39.74
TraesCS3B01G048800.1	Wheat	cytosol	39.39	39.39
Zm00001d039941_P001	Maize	cytosol	39.39	39.16
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	45.45	37.5
PGSC0003DMT400030603	Potato	cytosol	43.64	37.31
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	42.42	36.65
Solyc09g011710.2.1	Tomato	cytosol	44.24	35.1
GSMUA_Achr9P27260_001	Banana	peroxisome	30.3	34.48
PGSC0003DMT400049226	Potato	cytosol	39.39	33.33
TraesCS3A01G035500.1	Wheat	mitochondrion, plastid	41.21	32.69
PGSC0003DMT400049225	Potato	mitochondrion	43.64	30.77
Solyc10g086680.1.1	Tomato	mitochondrion	41.82	29.49
HORVU3Hr1G006940.2	Barley	cytosol	38.18	25.93

Protein Annotations

EnsemblPlants:GSMUA_Achr6P33860_001	EnsemblPlants:GSMUA_Achr6T33860_001	EnsemblPlantsGene:GSMUA_Achr6G33860_001	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF240	PFAM:PF00011
PFscan:PS01031	SUPFAM:SSF49764	UniParc:UPI0002952FE0	UniProt:M0TCH9	MapMan:19.1.8.1	:

Description

17.3 kDa class I heat shock protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G33860_001]

Coordinates

chr6:+:32797142..32797840

Molecular Weight (calculated)

18728.1 Da

IEP (calculated)

4.683

GRAVY (calculated)

-0.407

Length

165 amino acids

Sequence
(BLAST)

001: MSLIPFGFGP WRSDVFDPFS LDIWDPFEGF PFESPLYFPR LSFPPVAFSG EASAFNAARV DWKETPEAHV FTADLPGLRK EEVKVEVEDG RVLQISGERN
101: QEREEKTDTW YRVERSSGKF LRRFRLPENA KVDQVKAAME NGVLTVTVPK EGVMVPNVKS VDISG

Best Arabidopsis Sequence Match ( AT1G53540.1 )
(BLAST)

001: MSLIPSIFGG RRTNVFDPFS LDVFDPFEGF LTPSGLANAP AMDVAAFTNA KVDWRETPEA HVFKADLPGL RKEEVKVEVE DGNILQISGE RSNENEEKND
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG

Arabidopsis Description

HSP17.6C17.6 kDa class I heat shock protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P13853]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.