Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030603 | Potato | cytosol | 87.98 | 94.82 |
| Solyc06g076520.1.1 | Tomato | cytosol, nucleus, plastid | 34.62 | 46.75 |
| Solyc06g076560.1.1 | Tomato | cytosol, nucleus | 34.62 | 46.75 |
| Solyc06g076570.1.1 | Tomato | cytosol, extracellular, nucleus | 34.62 | 46.75 |
| Solyc09g015020.1.1 | Tomato | cytosol, nucleus | 34.62 | 46.75 |
| Solyc06g076540.1.1 | Tomato | cytosol, nucleus | 33.65 | 45.45 |
| GSMUA_Achr6P33860_001 | Banana | cytosol | 35.1 | 44.24 |
| VIT_13s0019g03170.t01 | Wine grape | cytosol | 33.65 | 44.03 |
| Solyc09g015000.2.1 | Tomato | cytosol | 27.88 | 43.28 |
| Solyc10g086680.1.1 | Tomato | mitochondrion | 47.6 | 42.31 |
| GSMUA_Achr9P03540_001 | Banana | cytosol | 32.21 | 41.88 |
| GSMUA_Achr7P14910_001 | Banana | cytosol | 33.17 | 41.07 |
| GSMUA_Achr8P00290_001 | Banana | cytosol | 27.88 | 40.0 |
| Solyc09g059210.1.1 | Tomato | cytosol, nucleus | 12.5 | 38.81 |
| Solyc07g045610.1.1 | Tomato | cytosol | 14.42 | 38.46 |
| KRH00090 | Soybean | cytosol | 30.29 | 36.84 |
| KRH49235 | Soybean | cytosol | 26.44 | 35.26 |
| Solyc02g093600.2.1 | Tomato | cytosol, plastid | 22.12 | 33.82 |
| Solyc04g072250.2.1 | Tomato | cytosol | 25.96 | 33.13 |
| Solyc04g014480.2.1 | Tomato | mitochondrion | 23.08 | 33.1 |
| Os01t0135900-02 | Rice | plasma membrane | 25.0 | 31.33 |
| TraesCS3B01G048700.1 | Wheat | cytosol | 24.52 | 31.1 |
| TraesCS3B01G048800.1 | Wheat | cytosol | 23.56 | 29.7 |
| HORVU3Hr1G006930.1 | Barley | cytosol | 23.56 | 29.7 |
| TraesCS3A01G035400.1 | Wheat | cytosol | 23.08 | 29.09 |
| KRH62434 | Soybean | cytosol | 21.63 | 28.66 |
| EES02533 | Sorghum | cytosol | 22.6 | 28.48 |
| Zm00001d039941_P001 | Maize | cytosol | 21.63 | 27.11 |
| Solyc01g102960.2.1 | Tomato | endoplasmic reticulum | 24.52 | 26.98 |
| Solyc03g113930.1.1 | Tomato | endoplasmic reticulum | 24.04 | 26.6 |
| TraesCS3A01G035500.1 | Wheat | mitochondrion, plastid | 25.48 | 25.48 |
| Solyc11g020330.1.1 | Tomato | plastid | 23.08 | 25.26 |
| HORVU3Hr1G006940.2 | Barley | cytosol | 23.08 | 19.75 |
Protein Annotations
| EnsemblPlants:Solyc09g011710.2.1 | EnsemblPlantsGene:Solyc09g011710.2 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF184 | PFAM:PF00011 | PFscan:PS01031 |
| SUPFAM:SSF49764 | UniParc:UPI000276B349 | UniProt:K4CRJ7 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr9:-:4976527..4978000
Molecular Weight (calculated)
24534.7 Da
IEP (calculated)
7.751
GRAVY (calculated)
-0.986
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLMPVFGGR RNHAHQVHDP YSDHQTHKVH DPYSDHKTHK MHDPYSRPSH PVYDPYSQHA HQVHDPFAHH DVWDPFHEFY LENPRSLIAP APSFHHVPAT
101: MAQIEYKETP ESHIFRCNLH GYKKEDVKVQ VEDEKILKIT GETRMMKKED NWHHYERSSG KFFTSFSLPL NSRADYVKSS MENGVLTITI PKKEISRNHH
201: HIRSVQIN
101: MAQIEYKETP ESHIFRCNLH GYKKEDVKVQ VEDEKILKIT GETRMMKKED NWHHYERSSG KFFTSFSLPL NSRADYVKSS MENGVLTITI PKKEISRNHH
201: HIRSVQIN
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Arabidopsis Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.