CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
MultiLoc:	extracellular
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039941_P001	Maize	cytosol	82.42	81.93
Os01t0135900-02	Rice	plasma membrane	70.91	70.48
HORVU3Hr1G006930.1	Barley	cytosol	67.88	67.88
TraesCS3B01G048700.1	Wheat	cytosol	63.64	64.02
TraesCS3B01G048800.1	Wheat	cytosol	63.03	63.03
TraesCS3A01G035400.1	Wheat	cytosol	63.03	63.03
TraesCS3A01G035500.1	Wheat	mitochondrion, plastid	63.64	50.48
EES00358	Sorghum	cytosol	44.24	48.34
EES00359	Sorghum	cytosol	43.03	47.33
EES02532	Sorghum	cytosol	43.03	46.71
EES02531	Sorghum	cytosol	42.42	46.05
EER95120	Sorghum	cytosol	41.82	43.67
VIT_13s0019g03170.t01	Wine grape	cytosol	41.21	42.77
GSMUA_Achr9P03540_001	Banana	cytosol	41.21	42.5
GSMUA_Achr6P33860_001	Banana	cytosol	41.82	41.82
EER95124	Sorghum	cytosol	40.0	41.77
KXG39718	Sorghum	cytosol	39.39	41.4
HORVU3Hr1G006940.2	Barley	cytosol	60.0	40.74
EES02535	Sorghum	cytosol	34.55	38.0
GSMUA_Achr7P14910_001	Banana	cytosol	36.36	35.71
KRH00090	Soybean	cytosol	33.33	32.16
GSMUA_Achr8P00290_001	Banana	cytosol	27.88	31.72
KRH49235	Soybean	cytosol	29.7	31.41
EER89539	Sorghum	mitochondrion	25.45	28.38
KRH62434	Soybean	cytosol	26.06	27.39
EES04437	Sorghum	mitochondrion	29.09	26.23
PGSC0003DMT400049226	Potato	cytosol	30.91	26.15
EES08263	Sorghum	endoplasmic reticulum	29.7	23.67
PGSC0003DMT400030603	Potato	cytosol	27.27	23.32
Solyc09g011710.2.1	Tomato	cytosol	28.48	22.6
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	29.09	22.22
PGSC0003DMT400049225	Potato	mitochondrion	30.91	21.79
Solyc10g086680.1.1	Tomato	mitochondrion	30.3	21.37

Protein Annotations

EnsemblPlants:EES02533	EnsemblPlantsGene:SORBI_3003G082300	EntrezGene:8073344	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF141	PFAM:PF00011
PFscan:PS01031	ProteinID:EES02533	ProteinID:EES02533.1	RefSeq:XP_002457413.1	SEG:seg	SUPFAM:SSF49764
unigene:Sbi.8316	UniParc:UPI0001A84B63	UniProt:C5XQS3	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr3:-:7065028..7066220

Molecular Weight (calculated)

17387.5 Da

IEP (calculated)

4.471

GRAVY (calculated)

0.121

Length

165 amino acids

Sequence
(BLAST)

001: MSLVRLLDTL ALDSWVRNPF SIFGTAVAAD AWLASDTSAF ANTYIESRDT AGAYVFSAAL PPGVRKEEVT VEVDEGNVLV ITGQRSVSRE ERVGDRWHHV
101: ERCCASFLGR FHLPEDAAVD GVRAAMDAGM LTVTVPKVGA AAAAIAEKPN EVPAAVEAAD GGPAC

Best Arabidopsis Sequence Match ( AT1G53540.1 )
(BLAST)

001: MSLIPSIFGG RRTNVFDPFS LDVFDPFEGF LTPSGLANAP AMDVAAFTNA KVDWRETPEA HVFKADLPGL RKEEVKVEVE DGNILQISGE RSNENEEKND
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG

Arabidopsis Description

HSP17.6C17.6 kDa class I heat shock protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P13853]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.