CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02531	Sorghum	cytosol	96.69	96.05
Os01t0136100-01	Rice	cytosol, nucleus, plastid	89.4	90.0
Os01t0136200-01	Rice	cytosol, plastid	88.74	89.33
TraesCSU01G175200.1	Wheat	cytosol, golgi	87.42	87.42
TraesCS3D01G045500.1	Wheat	cytosol	87.42	87.42
EES00359	Sorghum	cytosol	86.75	87.33
TraesCS3D01G045800.1	Wheat	cytosol	87.42	86.84
TraesCS3B01G049900.1	Wheat	cytosol	86.75	86.75
TraesCS3D01G046800.1	Wheat	cytosol	86.75	86.75
TraesCS3D01G046700.1	Wheat	cytosol	86.75	86.75
TraesCS3D01G045700.1	Wheat	cytosol	86.75	86.75
Os01t0136000-00	Rice	cytosol	85.43	86.58
TraesCS3A01G034500.1	Wheat	cytosol	86.09	86.09
TraesCS3B01G049800.1	Wheat	cytosol	86.09	86.09
Zm00001d039933_P001	Maize	plasma membrane	87.42	85.71
EES02532	Sorghum	cytosol	86.09	85.53
TraesCS3D01G046300.1	Wheat	cytosol	85.43	85.43
TraesCS3D01G046600.1	Wheat	cytosol	85.43	85.43
TraesCSU01G164000.1	Wheat	cytosol	85.43	85.43
TraesCS3D01G045600.1	Wheat	cytosol	84.77	84.77
TraesCSU01G194600.1	Wheat	cytosol	84.77	84.77
TraesCS3A01G033900.1	Wheat	cytosol	84.77	84.77
TraesCS3A01G034000.1	Wheat	cytosol	84.77	84.77
TraesCS5B01G245700.1	Wheat	cytosol	84.77	83.12
EER95124	Sorghum	cytosol	76.82	73.42
EER95120	Sorghum	cytosol	76.16	72.78
KXG39718	Sorghum	cytosol	73.51	70.7
HORVU3Hr1G007380.1	Barley	mitochondrion	86.09	66.67
HORVU3Hr1G006530.1	Barley	cytosol	87.42	62.86
TraesCSU01G047300.1	Wheat	cytosol	85.43	62.62
HORVU3Hr1G007500.4	Barley	cytosol, plastid	86.09	60.19
EES02535	Sorghum	cytosol	52.98	53.33
HORVU2Hr1G120170.1	Barley	cytosol	85.43	52.02
EES02533	Sorghum	cytosol	48.34	44.24
EES04437	Sorghum	mitochondrion	43.71	36.07
EER89539	Sorghum	mitochondrion	34.44	35.14
EES08263	Sorghum	endoplasmic reticulum	43.71	31.88
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	45.03	31.48

Protein Annotations

MapMan:19.1.8.1	Gene3D:2.60.40.790	EntrezGene:8061346	InterPro:A-crystallin/Hsp20_dom	UniProt:C5XQS0	EnsemblPlants:EES00358
ProteinID:EES00358	ProteinID:EES00358.1	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978
PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF241	EnsemblPlantsGene:SORBI_3003G082000	SUPFAM:SSF49764
unigene:Sbi.20494	UniParc:UPI0001A8478D	RefSeq:XP_002455238.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:7041779..7042516

Molecular Weight (calculated)

17070.1 Da

IEP (calculated)

5.412

GRAVY (calculated)

-0.675

Length

151 amino acids

Sequence
(BLAST)

001: MSLVRRSNVF DPFSLDLWDP FDNMFRSIVP SASGDSETAA FANARIDWKE TPEAHVFKAD LPGVKKEEVK VEVEDGNVLV ISGQRSREKE DKNDKWHRVE
101: RSSGQFLRRF RLPENAKTEE VKAGLENGVL TVTVPKAEEK KPEVKAIEIS G

Best Arabidopsis Sequence Match ( AT5G59720.1 )
(BLAST)

001: MSLIPSIFGG RRSNVFDPFS QDLWDPFEGF FTPSSALANA STARDVAAFT NARVDWKETP EAHVFKADLP GLKKEEVKVE VEDKNVLQIS GERSKENEEK
101: NDKWHRVERA SGKFMRRFRL PENAKMEEVK ATMENGVLTV VVPKAPEKKP QVKSIDISGA N

Arabidopsis Description

HSP18.118.1 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:P19037]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.