Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0136100-01 | Rice | cytosol, nucleus, plastid | 99.33 | 99.33 |
| Os01t0136000-00 | Rice | cytosol | 94.67 | 95.3 |
| EES00358 | Sorghum | cytosol | 89.33 | 88.74 |
| EES02531 | Sorghum | cytosol | 88.0 | 86.84 |
| EES02532 | Sorghum | cytosol | 88.0 | 86.84 |
| Zm00001d039936_P001 | Maize | cytosol | 86.67 | 85.53 |
| EES00359 | Sorghum | cytosol | 85.33 | 85.33 |
| TraesCSU01G175200.1 | Wheat | cytosol, golgi | 84.0 | 83.44 |
| TraesCS3D01G045500.1 | Wheat | cytosol | 84.0 | 83.44 |
| TraesCS3B01G049800.1 | Wheat | cytosol | 84.0 | 83.44 |
| TraesCS3D01G046800.1 | Wheat | cytosol | 83.33 | 82.78 |
| TraesCS3D01G046700.1 | Wheat | cytosol | 83.33 | 82.78 |
| TraesCS3D01G045700.1 | Wheat | cytosol | 83.33 | 82.78 |
| TraesCS3B01G049900.1 | Wheat | cytosol | 83.33 | 82.78 |
| TraesCS3D01G046600.1 | Wheat | cytosol | 82.67 | 82.12 |
| TraesCS3D01G046300.1 | Wheat | cytosol | 82.67 | 82.12 |
| TraesCS3A01G034500.1 | Wheat | cytosol | 82.67 | 82.12 |
| TraesCS3D01G045800.1 | Wheat | cytosol | 82.67 | 81.58 |
| TraesCS3D01G045600.1 | Wheat | cytosol | 82.0 | 81.46 |
| TraesCSU01G164000.1 | Wheat | cytosol | 82.0 | 81.46 |
| TraesCS3A01G034000.1 | Wheat | cytosol | 82.0 | 81.46 |
| TraesCS5B01G245700.1 | Wheat | cytosol | 83.33 | 81.17 |
| TraesCS3A01G033900.1 | Wheat | cytosol | 81.33 | 80.79 |
| TraesCSU01G194600.1 | Wheat | cytosol | 81.33 | 80.79 |
| Os03t0266900-02 | Rice | cytosol | 76.67 | 74.68 |
| Os03t0267000-00 | Rice | cytosol, plastid | 76.67 | 71.43 |
| Os03t0266300-01 | Rice | nucleus, plasma membrane | 76.0 | 70.81 |
| Os03t0267200-01 | Rice | cytosol, plastid | 74.67 | 70.44 |
| HORVU3Hr1G007380.1 | Barley | mitochondrion | 84.0 | 64.62 |
| HORVU3Hr1G006530.1 | Barley | cytosol | 84.0 | 60.0 |
| TraesCSU01G047300.1 | Wheat | cytosol | 82.0 | 59.71 |
| HORVU3Hr1G007500.4 | Barley | cytosol, plastid | 82.67 | 57.41 |
| Os01t0135800-01 | Rice | cytosol | 55.33 | 55.33 |
| HORVU2Hr1G120170.1 | Barley | cytosol | 82.0 | 49.6 |
| Os01t0135900-02 | Rice | plasma membrane | 53.33 | 48.19 |
| Os06t0253100-01 | Rice | mitochondrion | 36.67 | 37.67 |
| Os02t0128000-00 | Rice | cytosol | 43.33 | 36.72 |
| Os11t0244200-01 | Rice | endoplasmic reticulum | 42.67 | 31.07 |
| Os04t0445100-01 | Rice | nucleus, plastid | 40.67 | 28.37 |
Protein Annotations
| MapMan:19.1.8.1 | Gene3D:2.60.40.790 | EntrezGene:4325696 | EntrezGene:4325698 | InterPro:A-crystallin/Hsp20_dom | ProteinID:AAA33910.1 |
| EMBL:AK121025 | ProteinID:BAB64127.1 | ProteinID:BAF03869.1 | ProteinID:BAS70264.1 | UniProt:E5D3J7 | ProteinID:EAZ10447.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009408 | GO:GO:0009628 | EMBL:GU120338 | EMBL:GU120339 | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | EnsemblPlantsGene:Os01g0136200 | EnsemblPlants:Os01t0136200-01 | PFAM:PF00011 | PFscan:PS01031 |
| PANTHER:PTHR11527 | PANTHER:PTHR11527:SF241 | UniProt:Q943E6 | SUPFAM:SSF49764 | UniParc:UPI00000AB911 | RefSeq:XP_015630930.1 |
| RefSeq:XP_015633414.1 | SEG:seg | : | : | : | : |
Description
16.9 KDA CLASS I HEAT SHOCK PROTEIN 216.9 kDa class I heat shock protein 1. (Os01t0136200-01)
Coordinates
chr1:+:1951930..1952681
Molecular Weight (calculated)
16958.1 Da
IEP (calculated)
6.559
GRAVY (calculated)
-0.617
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVRRSNVF DPFSLDLWDP FDSVFRSVVP ATSDNDTAAF ANARIDWKET PESHVFKADL PGVKKEEVKV EVEEGNVLVI SGQRSKEKED KNDKWHRVER
101: SSGQFMRRFR LPENAKVDQV KAGMENGVLT VTVPKAEVKK PEVKAIEISG
101: SSGQFMRRFR LPENAKVDQV KAGMENGVLT VTVPKAEVKK PEVKAIEISG
001: MSLIPSIFGG RRSNVFDPFS QDLWDPFEGF FTPSSALANA STARDVAAFT NARVDWKETP EAHVFKADLP GLKKEEVKVE VEDKNVLQIS GERSKENEEK
101: NDKWHRVERA SGKFMRRFRL PENAKMEEVK ATMENGVLTV VVPKAPEKKP QVKSIDISGA N
101: NDKWHRVERA SGKFMRRFRL PENAKMEEVK ATMENGVLTV VVPKAPEKKP QVKSIDISGA N
Arabidopsis Description
HSP18.118.1 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:P19037]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.