Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008577_P001 | Maize | cytosol | 89.47 | 87.74 |
| Os01t0136100-01 | Rice | cytosol, nucleus, plastid | 86.18 | 87.33 |
| Os01t0136200-01 | Rice | cytosol, plastid | 85.53 | 86.67 |
| Os01t0136000-00 | Rice | cytosol | 82.89 | 84.56 |
| Zm00001d039933_P001 | Maize | plasma membrane | 84.87 | 83.77 |
| Zm00001d028555_P001 | Maize | extracellular, plasma membrane | 74.34 | 71.52 |
| Zm00001d028557_P001 | Maize | mitochondrion | 74.34 | 71.52 |
| Zm00001d028561_P001 | Maize | cytosol | 71.05 | 67.92 |
| Zm00001d047841_P001 | Maize | cytosol | 67.76 | 63.19 |
| Zm00001d039942_P001 | Maize | cytosol | 53.95 | 55.03 |
| Zm00001d039941_P001 | Maize | cytosol | 44.74 | 40.96 |
| Zm00001d044728_P001 | Maize | mitochondrion | 36.84 | 38.36 |
| Zm00001d007271_P001 | Maize | cytosol, endoplasmic reticulum | 44.74 | 36.36 |
| Zm00001d053965_P001 | Maize | mitochondrion, plastid | 43.42 | 35.87 |
| Zm00001d003554_P001 | Maize | endoplasmic reticulum, golgi | 42.76 | 31.25 |
| Zm00001d025508_P001 | Maize | extracellular | 42.11 | 29.49 |
Protein Annotations
| EMBL:BT043135 | EMBL:EU975309 | EnsemblPlants:Zm00001d039936_P001 | EnsemblPlants:Zm00001d039936_T001 | EnsemblPlantsGene:Zm00001d039936 | EntrezGene:100286044 |
| Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 |
| PANTHER:PTHR11527 | PANTHER:PTHR11527:SF241 | PFAM:PF00011 | PFscan:PS01031 | ProteinID:ONM30198.1 | SEG:seg |
| SUPFAM:SSF49764 | UniParc:UPI00017B801D | UniProt:B4G197 | MapMan:19.1.8.1 | : | : |
Description
17.4 kDa class I heat shock protein
Coordinates
chr3:+:19966205..19966663
Molecular Weight (calculated)
17224.3 Da
IEP (calculated)
5.875
GRAVY (calculated)
-0.650
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVRRSNVF DPFSMDLWDP FDTMFRSIVP SATSTNSETA AFASARIDWK ETPEAHVFKA DLPGVKKEEV KVEVEDGNML VISGQRSREK EDKDDKWHRV
101: ERSSGQFVRR FRLPENTKVD QVKAGLENGV LTVTVPKAEE KKPEVKAIEI SG
101: ERSSGQFVRR FRLPENTKVD QVKAGLENGV LTVTVPKAEE KKPEVKAIEI SG
001: MSLIPSIFGG RRTNVFDPFS LDVFDPFEGF LTPSGLANAP AMDVAAFTNA KVDWRETPEA HVFKADLPGL RKEEVKVEVE DGNILQISGE RSNENEEKND
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG
Arabidopsis Description
HSP17.6C17.6 kDa class I heat shock protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P13853]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.