Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04437 | Sorghum | mitochondrion | 85.33 | 85.79 |
| HORVU6Hr1G015130.1 | Barley | cytosol | 69.02 | 71.75 |
| Os02t0128000-00 | Rice | cytosol | 67.93 | 70.62 |
| TraesCSU01G019000.1 | Wheat | mitochondrion | 69.57 | 68.82 |
| TraesCS6A01G087600.1 | Wheat | cytosol | 68.48 | 68.11 |
| TraesCS6B01G110200.1 | Wheat | mitochondrion | 68.48 | 67.74 |
| Zm00001d039933_P001 | Maize | plasma membrane | 37.5 | 44.81 |
| Zm00001d039936_P001 | Maize | cytosol | 35.87 | 43.42 |
| Zm00001d039942_P001 | Maize | cytosol | 34.78 | 42.95 |
| Zm00001d008577_P001 | Maize | cytosol | 35.87 | 42.58 |
| Zm00001d028561_P001 | Maize | cytosol | 36.41 | 42.14 |
| Zm00001d028555_P001 | Maize | extracellular, plasma membrane | 35.87 | 41.77 |
| Zm00001d028557_P001 | Maize | mitochondrion | 35.87 | 41.77 |
| Zm00001d047841_P001 | Maize | cytosol | 34.24 | 38.65 |
| Zm00001d007271_P001 | Maize | cytosol, endoplasmic reticulum | 36.41 | 35.83 |
| Zm00001d044728_P001 | Maize | mitochondrion | 27.17 | 34.25 |
| Zm00001d003554_P001 | Maize | endoplasmic reticulum, golgi | 33.15 | 29.33 |
| Zm00001d025508_P001 | Maize | extracellular | 33.7 | 28.57 |
| Zm00001d039941_P001 | Maize | cytosol | 23.37 | 25.9 |
Protein Annotations
| EnsemblPlants:Zm00001d053965_P001 | EnsemblPlants:Zm00001d053965_T001 | EnsemblPlantsGene:Zm00001d053965 | EntrezGene:103654949 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom |
| InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF189 |
| PFAM:PF00011 | PFscan:PS01031 | ProteinID:AQK60868.1 | SEG:seg | SUPFAM:SSF49764 | UniParc:UPI0001D62E7D |
| UniProt:K7UST5 | MapMan:35.1 | : | : | : | : |
Description
22.0 kDa heat shock protein
Coordinates
chr4:+:244409108..244409662
Molecular Weight (calculated)
19856.6 Da
IEP (calculated)
7.797
GRAVY (calculated)
-0.488
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMLTSILGR KHQPPPQQQQ QQKGGGARTG TGAGAGTEAA AVEPVSIDIA EQGPLVDAIT LAAFAAPALG LPPFATASMD WKETPTAHVF MADLPGLRRD
101: EVKVEVEEER LLRISGQRQR AAEEKGDRWH RVERSSDRFV RTVRLPPNAN TDGAQAALQD GVLTVTVPKD NDRKAYGRLI TITN
101: EVKVEVEEER LLRISGQRQR AAEEKGDRWH RVERSSDRFV RTVRLPPNAN TDGAQAALQD GVLTVTVPKD NDRKAYGRLI TITN
001: MSLIPSIFGG RRTNVFDPFS LDVFDPFEGF LTPSGLANAP AMDVAAFTNA KVDWRETPEA HVFKADLPGL RKEEVKVEVE DGNILQISGE RSNENEEKND
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG
Arabidopsis Description
HSP17.6C17.6 kDa class I heat shock protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P13853]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.