Factsheet for Zm00001d003554_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum

Predictor Summary:

extracellular 4
golgi 5
plasma membrane 4
endoplasmic reticulum 5
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	90.87	87.5
Zm00001d025508_P001	Maize	extracellular	88.46	84.79
Os04t0445100-01	Rice	nucleus, plastid	76.92	74.42
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	75.96	72.15
TraesCS2D01G311400.1	Wheat	endoplasmic reticulum, golgi	75.48	71.69
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	73.56	66.81
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	54.81	57.0
KRG92477	Soybean	endoplasmic reticulum	50.0	54.17
KRH34328	Soybean	endoplasmic reticulum	48.56	51.79
VIT_18s0089g01270.t01	Wine grape	endoplasmic reticulum	45.67	51.08
KRH09251	Soybean	endoplasmic reticulum	47.6	50.25
CDX86006	Canola	extracellular	40.87	49.42
CDY05088	Canola	cytosol	46.63	49.24
CDX90748	Canola	extracellular	45.67	48.22
Bra000703.1-P	Field mustard	extracellular	45.67	48.22
Bra027999.1-P	Field mustard	extracellular	39.42	47.67
Zm00001d007271_P001	Maize	cytosol, endoplasmic reticulum	42.79	47.59
CDX93767	Canola	endoplasmic reticulum, extracellular, golgi	38.94	47.09
AT4G10250.1	Thale cress	endoplasmic reticulum	43.27	46.15
Solyc11g020330.1.1	Tomato	plastid	41.83	45.79
Zm00001d039942_P001	Maize	cytosol	32.69	45.64
Zm00001d008577_P001	Maize	cytosol	33.17	44.52
Zm00001d028555_P001	Maize	extracellular, plasma membrane	33.65	44.3
Zm00001d028557_P001	Maize	mitochondrion	33.65	44.3
KRG90262	Soybean	endoplasmic reticulum	41.35	44.1
Zm00001d028561_P001	Maize	cytosol	33.65	44.03
PGSC0003DMT400023932	Potato	endoplasmic reticulum	40.87	43.15
Zm00001d039933_P001	Maize	plasma membrane	31.73	42.86
Zm00001d039936_P001	Maize	cytosol	31.25	42.76
Zm00001d047841_P001	Maize	cytosol	31.73	40.49
Zm00001d053965_P001	Maize	mitochondrion, plastid	29.33	33.15
Zm00001d044728_P001	Maize	mitochondrion	21.15	30.14
Zm00001d039941_P001	Maize	cytosol	23.56	29.52

Protein Annotations

EntrezGene:100284772	MapMan:19.1.8.12	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	EMBL:BT064613	UniProt:C0P8J4
InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	ProteinID:ONM17149.1	PFAM:PF00011
PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF135	SUPFAM:SSF49764	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0001948BCA	EnsemblPlantsGene:Zm00001d003554	EnsemblPlants:Zm00001d003554_P001	EnsemblPlants:Zm00001d003554_T001	SEG:seg	:

Description

22.0 kDa heat shock protein

Coordinates

chr2:-:47866673..47867299

Molecular Weight (calculated)

22833.1 Da

IEP (calculated)

6.373

GRAVY (calculated)

-0.338

Length

208 amino acids

Sequence
(BLAST)

001: MSRRAAALLL ACLVAVTAAA LADGALLPWF GGGRRGLDEA AVSDVGLLAA DPFRILEHVP FGFDRDDVAM VSMARVDWRE TPDAHEIVVD VPGMRREDLR
101: IEVEDNRVLR VSGERRRAEE RKGDHWHREE RSYGRFWRRF RLPENADLDS VAASLDSGVL TVRFRKLAPE QIKGPRVVGI AGGDGGAEAK ESIGTGAGDG
201: HQTKKVEL

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.