Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05088 | Canola | cytosol | 91.79 | 90.86 |
| Bra000703.1-P | Field mustard | extracellular | 91.28 | 90.36 |
| CDX90748 | Canola | extracellular | 91.28 | 90.36 |
| KRG92477 | Soybean | endoplasmic reticulum | 61.03 | 61.98 |
| VIT_18s0089g01270.t01 | Wine grape | endoplasmic reticulum | 58.97 | 61.83 |
| KRH34328 | Soybean | endoplasmic reticulum | 61.54 | 61.54 |
| KRH09251 | Soybean | endoplasmic reticulum | 61.03 | 60.41 |
| GSMUA_Achr8P29100_001 | Banana | endoplasmic reticulum | 58.97 | 57.5 |
| KRG90262 | Soybean | endoplasmic reticulum | 54.87 | 54.87 |
| Solyc11g020330.1.1 | Tomato | plastid | 49.23 | 50.53 |
| PGSC0003DMT400023932 | Potato | endoplasmic reticulum | 50.77 | 50.25 |
| AT1G07400.1 | Thale cress | cytosol | 36.41 | 45.22 |
| AT1G59860.1 | Thale cress | cytosol | 35.9 | 45.16 |
| AT2G29500.1 | Thale cress | cytosol | 35.38 | 45.1 |
| KXG26390 | Sorghum | endoplasmic reticulum, extracellular, golgi | 48.72 | 43.98 |
| AT5G59720.1 | Thale cress | cytosol | 35.9 | 43.48 |
| Zm00001d003554_P001 | Maize | endoplasmic reticulum, golgi | 46.15 | 43.27 |
| Zm00001d025508_P001 | Maize | extracellular | 47.18 | 42.4 |
| AT3G46230.1 | Thale cress | cytosol | 33.85 | 42.31 |
| TraesCS2D01G311400.1 | Wheat | endoplasmic reticulum, golgi | 47.18 | 42.01 |
| TraesCS2A01G312900.1 | Wheat | endoplasmic reticulum, golgi | 46.67 | 41.55 |
| AT1G53540.1 | Thale cress | cytosol | 33.33 | 41.4 |
| Os04t0445100-01 | Rice | nucleus, plastid | 45.13 | 40.93 |
| HORVU2Hr1G077710.2 | Barley | endoplasmic reticulum, golgi | 46.15 | 39.3 |
| AT5G37670.1 | Thale cress | cytosol | 25.13 | 35.77 |
| AT2G19310.1 | Thale cress | cytosol | 18.97 | 22.84 |
Protein Annotations
| MapMan:19.1.8.12 | Gene3D:2.60.40.790 | EntrezGene:826616 | InterPro:A-crystallin/Hsp20_dom | ProteinID:AAC62802.1 | ProteinID:AEE82859.1 |
| EMBL:AK227769 | ArrayExpress:AT4G10250 | EnsemblPlantsGene:AT4G10250 | RefSeq:AT4G10250 | TAIR:AT4G10250 | RefSeq:AT4G10250-TAIR-G |
| EnsemblPlants:AT4G10250.1 | TAIR:AT4G10250.1 | Symbol:ATHSP22.0 | Unigene:At.246 | EMBL:BT004802 | ProteinID:CAB39778.1 |
| ProteinID:CAB78148.1 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 | InterPro:HSP20 |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | RefSeq:NP_192763.1 | PFAM:PF00011 | PO:PO:0001017 |
| PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS01031 |
| PANTHER:PTHR11527 | PANTHER:PTHR11527:SF135 | UniProt:Q38806 | SUPFAM:SSF49764 | SignalP:SignalP-noTM | EMBL:U11501 |
| UniParc:UPI000000C498 | SEG:seg | : | : | : | : |
Description
HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
Coordinates
chr4:+:6370338..6371372
Molecular Weight (calculated)
21998.4 Da
IEP (calculated)
5.466
GRAVY (calculated)
-0.469
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.