Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G07400.1 | Thale cress | cytosol | 92.9 | 91.72 |
| AT2G29500.1 | Thale cress | cytosol | 82.58 | 83.66 |
| KRH53964 | Soybean | cytosol | 74.19 | 76.67 |
| PGSC0003DMT400078008 | Potato | cytosol | 76.13 | 76.62 |
| Solyc06g076560.1.1 | Tomato | cytosol, nucleus | 74.84 | 75.32 |
| PGSC0003DMT400078006 | Potato | cytosol | 74.84 | 75.32 |
| Solyc06g076570.1.1 | Tomato | cytosol, extracellular, nucleus | 74.84 | 75.32 |
| Solyc06g076540.1.1 | Tomato | cytosol, nucleus | 74.19 | 74.68 |
| PGSC0003DMT400078201 | Potato | cytosol | 74.19 | 74.68 |
| KRH42102 | Soybean | cytosol | 73.55 | 74.51 |
| KRH50105 | Soybean | cytosol | 73.55 | 74.51 |
| Solyc06g076520.1.1 | Tomato | cytosol, nucleus, plastid | 73.55 | 74.03 |
| PGSC0003DMT400078007 | Potato | cytosol | 73.55 | 74.03 |
| PGSC0003DMT400078202 | Potato | cytosol | 73.55 | 74.03 |
| KRH42105 | Soybean | cytosol | 72.9 | 73.86 |
| KRH50107 | Soybean | cytosol | 72.9 | 73.86 |
| PGSC0003DMT400038705 | Potato | cytosol | 63.23 | 73.68 |
| KRH42103 | Soybean | cytosol | 72.26 | 73.2 |
| KRH63973 | Soybean | cytosol | 65.81 | 72.34 |
| KRH20397 | Soybean | cytosol | 71.61 | 72.08 |
| KRH20402 | Soybean | cytosol | 71.61 | 72.08 |
| KRH50104 | Soybean | endoplasmic reticulum | 74.84 | 72.05 |
| KRH50109 | Soybean | cytosol | 70.97 | 71.9 |
| KRH50102 | Soybean | cytosol | 70.97 | 71.9 |
| KRH20403 | Soybean | cytosol | 73.55 | 70.81 |
| KRH20400 | Soybean | cytosol | 70.32 | 70.78 |
| Solyc09g059210.1.1 | Tomato | cytosol, nucleus | 30.32 | 70.15 |
| AT3G46230.1 | Thale cress | cytosol | 68.39 | 67.95 |
| KRH20405 | Soybean | cytosol | 66.45 | 67.76 |
| AT1G53540.1 | Thale cress | cytosol | 68.39 | 67.52 |
| KRH15020 | Soybean | cytosol | 69.03 | 67.3 |
| AT5G59720.1 | Thale cress | cytosol | 69.68 | 67.08 |
| KRH57663 | Soybean | cytosol | 58.06 | 66.18 |
| Solyc07g045610.1.1 | Tomato | cytosol | 31.61 | 62.82 |
| AT5G37670.1 | Thale cress | cytosol | 40.65 | 45.99 |
| AT4G10250.1 | Thale cress | endoplasmic reticulum | 45.16 | 35.9 |
| AT2G19310.1 | Thale cress | cytosol | 32.9 | 31.48 |
Protein Annotations
| MapMan:19.1.8.1 | Gene3D:2.60.40.790 | EntrezGene:842280 | InterPro:A-crystallin/Hsp20_dom | UniProt:A0A178W5H0 | ProteinID:AAD39328.1 |
| ProteinID:AEE33629.1 | EMBL:AK175148 | EMBL:AK175265 | ArrayExpress:AT1G59860 | EnsemblPlantsGene:AT1G59860 | RefSeq:AT1G59860 |
| TAIR:AT1G59860 | RefSeq:AT1G59860-TAIR-G | EnsemblPlants:AT1G59860.1 | TAIR:AT1G59860.1 | EMBL:AY087202 | EMBL:BT024694 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006457 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 | GO:GO:0009408 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0051259 | InterPro:HSP20 |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | RefSeq:NP_176195.1 | ProteinID:OAP12941.1 | PFAM:PF00011 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS01031 | PANTHER:PTHR11527 |
| PANTHER:PTHR11527:SF190 | UniProt:Q9XIE3 | SUPFAM:SSF49764 | UniParc:UPI00000A86E7 | SEG:seg | : |
Description
HSP17.6A17.6 kDa class I heat shock protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE3]
Coordinates
chr1:+:22031343..22032250
Molecular Weight (calculated)
17624.8 Da
IEP (calculated)
7.790
GRAVY (calculated)
-0.678
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLIPSFFGN NRRINNNIFD PFSLDVWDPF KELQFPSSSS SAIANARVDW KETAEAHVFK ADLPGMKKEE VKVEIEDDSV LKISGERHVE KEEKQDTWHR
101: VERSSGGFSR KFRLPENVKM DQVKASMENG VLTVTVPKVE TNKKKAQVKS IDISG
101: VERSSGGFSR KFRLPENVKM DQVKASMENG VLTVTVPKVE TNKKKAQVKS IDISG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.