Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G59860.1 | Thale cress | cytosol | 91.72 | 92.9 |
| AT2G29500.1 | Thale cress | cytosol | 82.8 | 84.97 |
| PGSC0003DMT400078008 | Potato | cytosol | 76.43 | 77.92 |
| Solyc06g076570.1.1 | Tomato | cytosol, extracellular, nucleus | 75.16 | 76.62 |
| PGSC0003DMT400078006 | Potato | cytosol | 75.16 | 76.62 |
| KRH53964 | Soybean | cytosol | 72.61 | 76.0 |
| PGSC0003DMT400078201 | Potato | cytosol | 74.52 | 75.97 |
| Solyc06g076540.1.1 | Tomato | cytosol, nucleus | 74.52 | 75.97 |
| KRH42102 | Soybean | cytosol | 73.89 | 75.82 |
| PGSC0003DMT400078202 | Potato | cytosol | 73.89 | 75.32 |
| Solyc06g076560.1.1 | Tomato | cytosol, nucleus | 73.89 | 75.32 |
| KRH42105 | Soybean | cytosol | 73.25 | 75.16 |
| PGSC0003DMT400078007 | Potato | cytosol | 73.25 | 74.68 |
| Solyc06g076520.1.1 | Tomato | cytosol, nucleus, plastid | 73.25 | 74.68 |
| PGSC0003DMT400038705 | Potato | cytosol | 63.06 | 74.44 |
| KRH50105 | Soybean | cytosol | 71.97 | 73.86 |
| KRH50107 | Soybean | cytosol | 71.34 | 73.2 |
| KRH42103 | Soybean | cytosol | 70.7 | 72.55 |
| KRH63973 | Soybean | cytosol | 64.97 | 72.34 |
| KRH20402 | Soybean | cytosol | 70.7 | 72.08 |
| KRH20397 | Soybean | cytosol | 70.7 | 72.08 |
| KRH50102 | Soybean | cytosol | 70.06 | 71.9 |
| KRH50104 | Soybean | endoplasmic reticulum | 73.25 | 71.43 |
| KRH50109 | Soybean | cytosol | 69.43 | 71.24 |
| KRH20400 | Soybean | cytosol | 69.43 | 70.78 |
| KRH20403 | Soybean | cytosol | 71.97 | 70.19 |
| Solyc09g059210.1.1 | Tomato | cytosol, nucleus | 29.3 | 68.66 |
| AT5G59720.1 | Thale cress | cytosol | 70.06 | 68.32 |
| AT1G53540.1 | Thale cress | cytosol | 68.15 | 68.15 |
| AT3G46230.1 | Thale cress | cytosol | 67.52 | 67.95 |
| KRH20405 | Soybean | cytosol | 64.97 | 67.11 |
| KRH15020 | Soybean | cytosol | 67.52 | 66.67 |
| KRH57663 | Soybean | cytosol | 57.32 | 66.18 |
| Solyc07g045610.1.1 | Tomato | cytosol | 31.85 | 64.1 |
| AT5G37670.1 | Thale cress | cytosol | 39.49 | 45.26 |
| AT4G10250.1 | Thale cress | endoplasmic reticulum | 45.22 | 36.41 |
| AT2G19310.1 | Thale cress | cytosol | 33.76 | 32.72 |
Protein Annotations
| MapMan:19.1.8.1 | Gene3D:2.60.40.790 | EntrezGene:837252 | InterPro:A-crystallin/Hsp20_dom | UniProt:A0A178WJ08 | ProteinID:AAF79569.1 |
| ProteinID:AEE28120.1 | EMBL:AK118848 | ArrayExpress:AT1G07400 | EnsemblPlantsGene:AT1G07400 | RefSeq:AT1G07400 | TAIR:AT1G07400 |
| RefSeq:AT1G07400-TAIR-G | EnsemblPlants:AT1G07400.1 | TAIR:AT1G07400.1 | EMBL:AY086856 | Unigene:At.42302 | EMBL:BT005424 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 |
| GO:GO:0043621 | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | RefSeq:NP_172220.1 |
| ProteinID:OAP17453.1 | PFAM:PF00011 | PO:PO:0000293 | PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF190 |
| UniProt:Q9LNW0 | SUPFAM:SSF49764 | UniParc:UPI000000C649 | SEG:seg | : | : |
Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
Coordinates
chr1:+:2274926..2275783
Molecular Weight (calculated)
17829.1 Da
IEP (calculated)
6.291
GRAVY (calculated)
-0.680
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.