Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99119 | Canola | cytosol | 91.67 | 91.08 |
| Bra018216.1-P | Field mustard | cytosol | 90.38 | 89.81 |
| AT1G53540.1 | Thale cress | cytosol | 89.74 | 89.17 |
| CDX86069 | Canola | cytosol | 89.1 | 88.53 |
| AT5G59720.1 | Thale cress | cytosol | 81.41 | 78.88 |
| TraesCS4A01G092200.1 | Wheat | cytosol | 73.08 | 75.5 |
| TraesCS4B01G212200.1 | Wheat | cytosol | 75.0 | 74.52 |
| TraesCS4D01G213100.1 | Wheat | cytosol | 73.72 | 73.25 |
| TraesCS4B01G212300.1 | Wheat | cytosol | 72.44 | 72.9 |
| TraesCS4D01G213300.1 | Wheat | cytosol | 73.08 | 72.61 |
| TraesCS4A01G092100.1 | Wheat | cytosol | 73.08 | 72.15 |
| TraesCS4D01G212300.1 | Wheat | cytosol | 72.44 | 71.97 |
| HORVU4Hr1G060720.2 | Barley | cytosol | 72.44 | 71.52 |
| EER95124 | Sorghum | cytosol | 71.79 | 70.89 |
| Os03t0266900-02 | Rice | cytosol | 69.87 | 70.78 |
| Zm00001d028555_P001 | Maize | extracellular, plasma membrane | 71.15 | 70.25 |
| Zm00001d028557_P001 | Maize | mitochondrion | 71.15 | 70.25 |
| Os03t0267200-01 | Rice | cytosol, plastid | 70.51 | 69.18 |
| EER95120 | Sorghum | cytosol | 69.87 | 68.99 |
| KXG39718 | Sorghum | cytosol | 69.23 | 68.79 |
| AT1G59860.1 | Thale cress | cytosol | 67.95 | 68.39 |
| TraesCS4D01G212500.1 | Wheat | cytosol | 67.95 | 68.39 |
| Os03t0266300-01 | Rice | nucleus, plasma membrane | 69.87 | 67.7 |
| AT1G07400.1 | Thale cress | cytosol | 67.95 | 67.52 |
| AT2G29500.1 | Thale cress | cytosol | 66.03 | 67.32 |
| TraesCS4A01G092700.1 | Wheat | cytosol | 66.67 | 67.1 |
| TraesCS4A01G092600.1 | Wheat | cytosol | 66.67 | 67.1 |
| TraesCS4A01G092900.1 | Wheat | cytosol | 67.95 | 67.09 |
| Os03t0267000-00 | Rice | cytosol, plastid | 69.23 | 67.08 |
| Zm00001d028561_P001 | Maize | cytosol | 67.95 | 66.67 |
| TraesCS4D01G212200.1 | Wheat | cytosol | 68.59 | 66.46 |
| TraesCS4B01G211600.1 | Wheat | cytosol | 66.67 | 66.24 |
| HORVU4Hr1G060760.1 | Barley | cytosol | 62.82 | 65.33 |
| TraesCS4A01G092800.1 | Wheat | cytosol | 66.03 | 65.19 |
| TraesCS4D01G212400.1 | Wheat | cytosol | 66.03 | 65.19 |
| Zm00001d047841_P001 | Maize | cytosol | 67.31 | 64.42 |
| AT5G37670.1 | Thale cress | cytosol | 38.46 | 43.8 |
| AT2G19310.1 | Thale cress | cytosol | 35.26 | 33.95 |
| AT4G10250.1 | Thale cress | endoplasmic reticulum | 42.31 | 33.85 |
Protein Annotations
| MapMan:19.1.8.1 | Gene3D:2.60.40.790 | EntrezGene:823768 | InterPro:A-crystallin/Hsp20_dom | ProteinID:AEE78138.1 | EMBL:AF410266 |
| ArrayExpress:AT3G46230 | EnsemblPlantsGene:AT3G46230 | RefSeq:AT3G46230 | TAIR:AT3G46230 | RefSeq:AT3G46230-TAIR-G | EnsemblPlants:AT3G46230.1 |
| TAIR:AT3G46230.1 | Symbol:ATHSP17.4 | EMBL:AY143803 | Unigene:At.1484 | ProteinID:CAA35182.1 | ProteinID:CAB90950.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 | InterPro:HSP20 |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | RefSeq:NP_190209.1 | UniProt:P19036 | PFAM:PF00011 |
| PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF241 |
| SUPFAM:SSF49764 | UniParc:UPI000012CBEA | SEG:seg | : | : | : |
Description
HSP17.4A17.4 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:P19036]
Coordinates
chr3:-:16984118..16984867
Molecular Weight (calculated)
17440.5 Da
IEP (calculated)
4.942
GRAVY (calculated)
-0.569
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVPSFFGG RRTNVFDPFS LDVWDPFEGF LTPGLTNAPA KDVAAFTNAK VDWRETPEAH VFKADVPGLK KEEVKVEVED GNILQISGER SSENEEKSDT
101: WHRVERSSGK FMRRFRLPEN AKVEEVKASM ENGVLSVTVP KVQESKPEVK SVDISG
101: WHRVERSSGK FMRRFRLPEN AKVEEVKASM ENGVLSVTVP KVQESKPEVK SVDISG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.