Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G092900.1 | Wheat | cytosol | 94.41 | 96.2 |
| TraesCS4B01G211600.1 | Wheat | cytosol | 90.68 | 92.99 |
| TraesCS4D01G212400.1 | Wheat | cytosol | 90.68 | 92.41 |
| Zm00001d028557_P001 | Maize | mitochondrion | 89.44 | 91.14 |
| Zm00001d028555_P001 | Maize | extracellular, plasma membrane | 89.44 | 91.14 |
| EER95124 | Sorghum | cytosol | 88.2 | 89.87 |
| KXG39718 | Sorghum | cytosol | 87.58 | 89.81 |
| TraesCS4D01G213100.1 | Wheat | cytosol | 86.34 | 88.53 |
| TraesCS4D01G212500.1 | Wheat | cytosol | 85.09 | 88.39 |
| TraesCS4D01G213300.1 | Wheat | cytosol | 85.09 | 87.26 |
| Os03t0266900-02 | Rice | cytosol | 82.61 | 86.36 |
| Os03t0267000-00 | Rice | cytosol, plastid | 86.34 | 86.34 |
| TraesCS4D01G212300.1 | Wheat | cytosol | 83.23 | 85.35 |
| Zm00001d047841_P001 | Maize | cytosol | 84.47 | 83.44 |
| Os03t0267200-01 | Rice | cytosol, plastid | 81.99 | 83.02 |
| TraesCS3D01G046700.1 | Wheat | cytosol | 69.57 | 74.17 |
| TraesCS3D01G046800.1 | Wheat | cytosol | 69.57 | 74.17 |
| TraesCS3D01G045500.1 | Wheat | cytosol | 68.94 | 73.51 |
| TraesCS3D01G045600.1 | Wheat | cytosol | 68.32 | 72.85 |
| TraesCS3D01G045700.1 | Wheat | cytosol | 68.32 | 72.85 |
| TraesCS3D01G046300.1 | Wheat | cytosol | 68.32 | 72.85 |
| TraesCS3D01G046600.1 | Wheat | cytosol | 68.32 | 72.85 |
| TraesCS3D01G045800.1 | Wheat | cytosol | 67.7 | 71.71 |
| CDY60563 | Canola | cytosol | 67.7 | 71.71 |
| Bra020295.1-P | Field mustard | cytosol | 67.7 | 71.71 |
| Bra006697.1-P | Field mustard | cytosol | 66.46 | 70.39 |
| Bra002539.1-P | Field mustard | plastid | 69.57 | 70.0 |
| CDY56096 | Canola | cytosol | 65.84 | 69.74 |
| AT3G46230.1 | Thale cress | cytosol | 66.46 | 68.59 |
| AT5G59720.1 | Thale cress | cytosol | 68.32 | 68.32 |
| AT1G53540.1 | Thale cress | cytosol | 66.46 | 68.15 |
| CDX99119 | Canola | cytosol | 66.46 | 68.15 |
| Bra018216.1-P | Field mustard | cytosol | 66.46 | 68.15 |
| CDX88719 | Canola | cytosol | 67.7 | 68.12 |
| CDX71079 | Canola | cytosol | 67.7 | 68.12 |
| CDY49575 | Canola | plastid | 67.7 | 68.12 |
| CDX86069 | Canola | cytosol | 65.22 | 66.88 |
| TraesCS7D01G185600.1 | Wheat | cytosol | 43.48 | 50.72 |
| TraesCS7D01G185500.1 | Wheat | cytosol | 48.45 | 48.75 |
| TraesCS3D01G044400.1 | Wheat | cytosol | 43.48 | 45.16 |
| TraesCS7D01G205400.1 | Wheat | nucleus | 36.65 | 42.75 |
| TraesCS4D01G086200.1 | Wheat | endoplasmic reticulum | 41.61 | 33.0 |
| TraesCS2D01G311400.1 | Wheat | endoplasmic reticulum, golgi | 40.99 | 30.14 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G212200.1 | EnsemblPlantsGene:TraesCS4D01G212200 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF240 | PFAM:PF00011 | PFscan:PS01031 |
| SEG:seg | SUPFAM:SSF49764 | TIGR:cd06472 | MapMan:19.1.8.1 | : | : |
Description
No Description!
Coordinates
chr4D:+:365187811..365188977
Molecular Weight (calculated)
17695.8 Da
IEP (calculated)
5.378
GRAVY (calculated)
-0.572
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLIPRGNAF DPFSLDLWDP FDGFPFGSGG SSSGGSLFPS FPRISSETAA FAGARIDWKE TPEAHVFKAD VPGLKKEEVK VEVEDGNVLQ ISGERNKEQE
101: EKTDTWHRVE RSSGKFLRKF RLPEDAKADQ IKAAMENGVL TVTVPKAEAK KPEVKSIQIS G
101: EKTDTWHRVE RSSGKFLRKF RLPEDAKADQ IKAAMENGVL TVTVPKAEAK KPEVKSIQIS G
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Arabidopsis Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.