Factsheet for TraesCS3D01G045600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G046800.1	Wheat	cytosol	97.35	97.35
TraesCS3D01G046700.1	Wheat	cytosol	97.35	97.35
TraesCS3A01G033900.1	Wheat	cytosol	97.35	97.35
TraesCS3A01G034000.1	Wheat	cytosol	97.35	97.35
TraesCS3D01G045500.1	Wheat	cytosol	96.69	96.69
TraesCS3B01G049800.1	Wheat	cytosol	96.03	96.03
TraesCS3D01G045700.1	Wheat	cytosol	95.36	95.36
TraesCSU01G194600.1	Wheat	cytosol	94.7	94.7
TraesCS3D01G046600.1	Wheat	cytosol	94.04	94.04
TraesCS3D01G046300.1	Wheat	cytosol	94.04	94.04
TraesCS3D01G045800.1	Wheat	cytosol	92.72	92.11
EES02531	Sorghum	cytosol	85.43	84.87
EES00358	Sorghum	cytosol	84.77	84.77
EES00359	Sorghum	cytosol	82.12	82.67
Os01t0136100-01	Rice	cytosol, nucleus, plastid	82.12	82.67
Zm00001d008577_P001	Maize	cytosol	84.77	82.58
Os01t0136200-01	Rice	cytosol, plastid	81.46	82.0
Os01t0136000-00	Rice	cytosol	80.79	81.88
EES02532	Sorghum	cytosol	81.46	80.92
TraesCS4D01G213100.1	Wheat	cytosol	72.85	70.06
HORVU3Hr1G006530.1	Barley	cytosol	97.35	70.0
TraesCS4D01G212500.1	Wheat	cytosol	70.86	69.03
TraesCS4D01G213300.1	Wheat	cytosol	71.52	68.79
TraesCS4D01G212200.1	Wheat	cytosol	72.85	68.32
TraesCS4D01G212300.1	Wheat	cytosol	70.86	68.15
TraesCS4D01G212400.1	Wheat	cytosol	69.54	66.46
TraesCS3D01G044400.1	Wheat	cytosol	47.02	45.81
TraesCS7D01G185600.1	Wheat	cytosol	41.06	44.93
TraesCS7D01G185500.1	Wheat	cytosol	46.36	43.75
TraesCS7D01G205400.1	Wheat	nucleus	37.75	41.3
TraesCS4D01G086200.1	Wheat	endoplasmic reticulum	44.37	33.0
TraesCS2D01G311400.1	Wheat	endoplasmic reticulum, golgi	39.74	27.4

Protein Annotations

EnsemblPlants:TraesCS3D01G045600.1	EnsemblPlantsGene:TraesCS3D01G045600	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF241	PFAM:PF00011	PFscan:PS01031
SEG:seg	SUPFAM:SSF49764	TIGR:cd06472	MapMan:19.1.8.1	:	:

Description

No Description!

Coordinates

chr3D:-:17406976..17407431

Molecular Weight (calculated)

16846.0 Da

IEP (calculated)

7.699

GRAVY (calculated)

-0.552

Length

151 amino acids

Sequence
(BLAST)

001: MSIVRRSNVF DPLADLWADP FDTFRSIVPA ISGGNSETAA FANARMDWKE TPEAHVFKAD LPGVKKEEVK VEVEDGNVLV VSGERTKEKE DKNDKWHRVE
101: RSSGKFVRRF RLPEDAKVED VKAGLENGVL TVTVPKAQVK KPEVKAIQIS G

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.