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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G092100.1
TraesCS4A01G092200.1
TraesCS4A01G092600.1
TraesCS4A01G092700.1
TraesCS4A01G092800.1
TraesCS4A01G092900.1
TraesCS4B01G211600.1
TraesCS4B01G212200.1
TraesCS4B01G212300.1
TraesCS4D01G212200.1
TraesCS4D01G212300.1
TraesCS4D01G212400.1
TraesCS4D01G212500.1
TraesCS4D01G213100.1
TraesCS4D01G213300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G59720.1 TraesCS4A01G092100.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4A01G092200.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4A01G092600.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4A01G092700.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4A01G092800.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4A01G092900.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4B01G211600.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4B01G212200.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4B01G212300.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4D01G212200.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4D01G212300.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4D01G212400.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4D01G212500.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4D01G213100.1 AT5G59720.1 21798944
AT5G59720.1 TraesCS4D01G213300.1 AT5G59720.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G213300.1 Wheat cytosol 98.73 98.73
TraesCS4A01G092100.1 Wheat cytosol 98.09 97.47
HORVU4Hr1G060720.2 Barley cytosol 97.45 96.84
TraesCS4D01G212300.1 Wheat cytosol 94.9 94.9
TraesCS4B01G212300.1 Wheat cytosol 93.63 94.84
Zm00001d028555_P001 Maize extracellular, plasma membrane 91.08 90.51
Zm00001d028557_P001 Maize mitochondrion 90.45 89.87
EER95124 Sorghum cytosol 89.81 89.24
Os03t0266300-01 Rice nucleus, plasma membrane 91.08 88.82
KXG39718 Sorghum cytosol 87.26 87.26
TraesCS4D01G212500.1 Wheat cytosol 85.99 87.1
TraesCS4D01G212200.1 Wheat cytosol 88.53 86.34
TraesCS4D01G212400.1 Wheat cytosol 85.35 84.81
Zm00001d047841_P001 Maize cytosol 84.71 81.6
CDY60563 Canola cytosol 72.61 75.0
Bra020295.1-P Field mustard cytosol 72.61 75.0
CDY56096 Canola cytosol 71.97 74.34
TraesCS3D01G046800.1 Wheat cytosol 71.34 74.17
TraesCS3D01G046700.1 Wheat cytosol 71.34 74.17
AT3G46230.1 Thale cress cytosol 73.25 73.72
Bra006697.1-P Field mustard cytosol 71.34 73.68
TraesCS3D01G045500.1 Wheat cytosol 70.7 73.51
AT1G53540.1 Thale cress cytosol 73.25 73.25
CDX88719 Canola cytosol 74.52 73.12
CDX71079 Canola cytosol 74.52 73.12
TraesCS3D01G045600.1 Wheat cytosol 70.06 72.85
TraesCS3D01G045700.1 Wheat cytosol 70.06 72.85
CDX86069 Canola cytosol 72.61 72.61
TraesCS3D01G046300.1 Wheat cytosol 69.43 72.19
TraesCS3D01G046600.1 Wheat cytosol 69.43 72.19
CDX99119 Canola cytosol 71.97 71.97
Bra018216.1-P Field mustard cytosol 71.97 71.97
Bra002539.1-P Field mustard plastid 73.25 71.88
TraesCS3D01G045800.1 Wheat cytosol 69.43 71.71
AT5G59720.1 Thale cress cytosol 73.25 71.43
CDY49575 Canola plastid 71.34 70.0
TraesCS7D01G185600.1 Wheat cytosol 43.31 49.28
TraesCS7D01G185500.1 Wheat cytosol 49.04 48.12
TraesCS3D01G044400.1 Wheat cytosol 46.5 47.1
TraesCS7D01G205400.1 Wheat nucleus 37.58 42.75
TraesCS4D01G086200.1 Wheat endoplasmic reticulum 42.68 33.0
TraesCS2D01G311400.1 Wheat endoplasmic reticulum, golgi 42.68 30.59
Protein Annotations
EnsemblPlants:TraesCS4D01G213100.1EnsemblPlantsGene:TraesCS4D01G213100Gene3D:2.60.40.790InterPro:A-crystallin/Hsp20_domInterPro:HSP20InterPro:HSP20-like_chaperone
InterPro:IPR002068InterPro:IPR008978PANTHER:PTHR11527PANTHER:PTHR11527:SF240PFAM:PF00011PFscan:PS01031
SEG:segSUPFAM:SSF49764TIGR:cd06472MapMan:19.1.8.1::
Description
No Description!
Coordinates
chr4D:-:365864520..365864993
Molecular Weight (calculated)
17531.5 Da
IEP (calculated)
5.872
GRAVY (calculated)
-0.671
Length
157 amino acids
Sequence
(BLAST)
001: MSLIRRSNVF DPFSLDFFDP FDGFPFGSGS NSSGSLIPRT SSDTAAFAGA RIDWKETPEA HVFKADVPGL KKEEVKVEVE DGNILQISGE RNKEQEEKTD
101: TWHRVERSSG KFLRRFRLPE NAKAEQVKAS MENGVLTVTV PKEEAKKPEV KSIQISG
Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Arabidopsis Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.