Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88719 | Canola | cytosol | 91.93 | 92.5 |
| Bra006697.1-P | Field mustard | cytosol | 86.34 | 91.45 |
| CDY60563 | Canola | cytosol | 85.71 | 90.79 |
| Bra020295.1-P | Field mustard | cytosol | 85.71 | 90.79 |
| CDX71079 | Canola | cytosol | 90.06 | 90.62 |
| CDY56096 | Canola | cytosol | 85.09 | 90.13 |
| Bra002539.1-P | Field mustard | plastid | 88.82 | 89.38 |
| CDY49575 | Canola | plastid | 86.96 | 87.5 |
| AT1G53540.1 | Thale cress | cytosol | 83.23 | 85.35 |
| AT3G46230.1 | Thale cress | cytosol | 78.88 | 81.41 |
| TraesCS4A01G092200.1 | Wheat | cytosol | 70.19 | 74.83 |
| Os03t0266900-02 | Rice | cytosol | 70.81 | 74.03 |
| TraesCS4B01G212200.1 | Wheat | cytosol | 72.05 | 73.89 |
| TraesCS4D01G213100.1 | Wheat | cytosol | 71.43 | 73.25 |
| TraesCS4B01G212300.1 | Wheat | cytosol | 70.19 | 72.9 |
| Zm00001d028555_P001 | Maize | extracellular, plasma membrane | 71.43 | 72.78 |
| TraesCS4A01G092100.1 | Wheat | cytosol | 71.43 | 72.78 |
| Zm00001d028557_P001 | Maize | mitochondrion | 71.43 | 72.78 |
| EER95124 | Sorghum | cytosol | 70.81 | 72.15 |
| TraesCS4D01G213300.1 | Wheat | cytosol | 70.19 | 71.97 |
| TraesCS4D01G212300.1 | Wheat | cytosol | 70.19 | 71.97 |
| AT2G29500.1 | Thale cress | cytosol | 68.32 | 71.9 |
| HORVU4Hr1G060720.2 | Barley | cytosol | 70.19 | 71.52 |
| EER95120 | Sorghum | cytosol | 70.19 | 71.52 |
| Os03t0267000-00 | Rice | cytosol, plastid | 70.81 | 70.81 |
| KXG39718 | Sorghum | cytosol | 68.94 | 70.7 |
| TraesCS4D01G212500.1 | Wheat | cytosol | 67.7 | 70.32 |
| AT1G07400.1 | Thale cress | cytosol | 68.32 | 70.06 |
| AT1G59860.1 | Thale cress | cytosol | 67.08 | 69.68 |
| TraesCS4A01G092900.1 | Wheat | cytosol | 68.32 | 69.62 |
| Os03t0267200-01 | Rice | cytosol, plastid | 68.32 | 69.18 |
| TraesCS4A01G092700.1 | Wheat | cytosol | 66.46 | 69.03 |
| Os03t0266300-01 | Rice | nucleus, plasma membrane | 68.94 | 68.94 |
| Zm00001d028561_P001 | Maize | cytosol | 67.7 | 68.55 |
| TraesCS4A01G092600.1 | Wheat | cytosol | 65.84 | 68.39 |
| TraesCS4D01G212200.1 | Wheat | cytosol | 68.32 | 68.32 |
| HORVU4Hr1G060760.1 | Barley | cytosol | 62.73 | 67.33 |
| TraesCS4B01G211600.1 | Wheat | cytosol | 65.22 | 66.88 |
| TraesCS4A01G092800.1 | Wheat | cytosol | 65.22 | 66.46 |
| TraesCS4D01G212400.1 | Wheat | cytosol | 65.22 | 66.46 |
| Zm00001d047841_P001 | Maize | cytosol | 67.08 | 66.26 |
| AT5G37670.1 | Thale cress | cytosol | 37.89 | 44.53 |
| AT4G10250.1 | Thale cress | endoplasmic reticulum | 43.48 | 35.9 |
| AT2G19310.1 | Thale cress | cytosol | 34.16 | 33.95 |
Protein Annotations
| MapMan:19.1.8.1 | Gene3D:2.60.40.790 | EntrezGene:836093 | InterPro:A-crystallin/Hsp20_dom | UniProt:A0A178UES7 | ProteinID:AED97223.1 |
| EMBL:AK228529 | ArrayExpress:AT5G59720 | EnsemblPlantsGene:AT5G59720 | RefSeq:AT5G59720 | TAIR:AT5G59720 | RefSeq:AT5G59720-TAIR-G |
| EnsemblPlants:AT5G59720.1 | TAIR:AT5G59720.1 | EMBL:AY070385 | EMBL:AY088849 | EMBL:AY122948 | ProteinID:BAB09509.1 |
| ProteinID:CAA35183.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 |
| GO:GO:0009644 | GO:GO:0010286 | GO:GO:0042542 | Symbol:HSP18.2 | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | RefSeq:NP_200780.1 | ProteinID:OAO91667.1 | UniProt:P19037 | PFAM:PF00011 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020100 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF241 |
| SUPFAM:SSF49764 | UniParc:UPI0000001795 | SEG:seg | : | : | : |
Description
HSP18.118.1 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:P19037]
Coordinates
chr5:+:24062323..24063300
Molecular Weight (calculated)
18135.5 Da
IEP (calculated)
7.700
GRAVY (calculated)
-0.657
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLIPSIFGG RRSNVFDPFS QDLWDPFEGF FTPSSALANA STARDVAAFT NARVDWKETP EAHVFKADLP GLKKEEVKVE VEDKNVLQIS GERSKENEEK
101: NDKWHRVERA SGKFMRRFRL PENAKMEEVK ATMENGVLTV VVPKAPEKKP QVKSIDISGA N
101: NDKWHRVERA SGKFMRRFRL PENAKMEEVK ATMENGVLTV VVPKAPEKKP QVKSIDISGA N
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.