Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G46230.1 | Thale cress | cytosol | 89.17 | 89.74 |
| CDX99119 | Canola | cytosol | 88.53 | 88.53 |
| Bra018216.1-P | Field mustard | cytosol | 87.9 | 87.9 |
| CDX86069 | Canola | cytosol | 87.9 | 87.9 |
| AT5G59720.1 | Thale cress | cytosol | 85.35 | 83.23 |
| TraesCS4A01G092200.1 | Wheat | cytosol | 72.61 | 75.5 |
| TraesCS4B01G212200.1 | Wheat | cytosol | 74.52 | 74.52 |
| TraesCS4D01G213100.1 | Wheat | cytosol | 73.25 | 73.25 |
| TraesCS4A01G092100.1 | Wheat | cytosol | 72.61 | 72.15 |
| Os03t0266900-02 | Rice | cytosol | 70.7 | 72.08 |
| TraesCS4D01G213300.1 | Wheat | cytosol | 71.97 | 71.97 |
| TraesCS4D01G212300.1 | Wheat | cytosol | 71.97 | 71.97 |
| HORVU4Hr1G060720.2 | Barley | cytosol | 71.97 | 71.52 |
| TraesCS4B01G212300.1 | Wheat | cytosol | 70.06 | 70.97 |
| EER95124 | Sorghum | cytosol | 71.34 | 70.89 |
| Zm00001d028557_P001 | Maize | mitochondrion | 70.7 | 70.25 |
| Zm00001d028555_P001 | Maize | extracellular, plasma membrane | 70.7 | 70.25 |
| Os03t0267200-01 | Rice | cytosol, plastid | 70.7 | 69.81 |
| AT2G29500.1 | Thale cress | cytosol | 67.52 | 69.28 |
| EER95120 | Sorghum | cytosol | 69.43 | 68.99 |
| KXG39718 | Sorghum | cytosol | 68.79 | 68.79 |
| AT1G59860.1 | Thale cress | cytosol | 67.52 | 68.39 |
| Os03t0267000-00 | Rice | cytosol, plastid | 70.06 | 68.32 |
| Os03t0266300-01 | Rice | nucleus, plasma membrane | 70.06 | 68.32 |
| AT1G07400.1 | Thale cress | cytosol | 68.15 | 68.15 |
| Zm00001d028561_P001 | Maize | cytosol | 68.79 | 67.92 |
| TraesCS4A01G092600.1 | Wheat | cytosol | 66.24 | 67.1 |
| TraesCS4D01G212500.1 | Wheat | cytosol | 66.24 | 67.1 |
| TraesCS4A01G092900.1 | Wheat | cytosol | 67.52 | 67.09 |
| TraesCS4D01G212200.1 | Wheat | cytosol | 68.15 | 66.46 |
| TraesCS4A01G092800.1 | Wheat | cytosol | 66.24 | 65.82 |
| TraesCS4D01G212400.1 | Wheat | cytosol | 66.24 | 65.82 |
| TraesCS4A01G092700.1 | Wheat | cytosol | 64.97 | 65.81 |
| TraesCS4B01G211600.1 | Wheat | cytosol | 65.61 | 65.61 |
| HORVU4Hr1G060760.1 | Barley | cytosol | 62.42 | 65.33 |
| Zm00001d047841_P001 | Maize | cytosol | 66.88 | 64.42 |
| AT5G37670.1 | Thale cress | cytosol | 36.94 | 42.34 |
| AT2G19310.1 | Thale cress | cytosol | 34.39 | 33.33 |
| AT4G10250.1 | Thale cress | endoplasmic reticulum | 41.4 | 33.33 |
Protein Annotations
| MapMan:19.1.8.1 | Gene3D:2.60.40.790 | EntrezGene:841789 | InterPro:A-crystallin/Hsp20_dom | ProteinID:AAG51972.1 | ProteinID:AEE32954.1 |
| ArrayExpress:AT1G53540 | EnsemblPlantsGene:AT1G53540 | RefSeq:AT1G53540 | TAIR:AT1G53540 | RefSeq:AT1G53540-TAIR-G | EnsemblPlants:AT1G53540.1 |
| TAIR:AT1G53540.1 | EMBL:BT024697 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 |
| RefSeq:NP_175759.1 | UniProt:P13853 | PFAM:PF00011 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS01031 |
| PANTHER:PTHR11527 | PANTHER:PTHR11527:SF241 | SUPFAM:SSF49764 | UniParc:UPI000012CBF4 | EMBL:X16076 | SEG:seg |
Description
HSP17.6C17.6 kDa class I heat shock protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P13853]
Coordinates
chr1:+:19980299..19981199
Molecular Weight (calculated)
17604.8 Da
IEP (calculated)
5.126
GRAVY (calculated)
-0.578
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLIPSIFGG RRTNVFDPFS LDVFDPFEGF LTPSGLANAP AMDVAAFTNA KVDWRETPEA HVFKADLPGL RKEEVKVEVE DGNILQISGE RSNENEEKND
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.