CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02532	Sorghum	cytosol	88.67	87.5
EES02531	Sorghum	cytosol	88.0	86.84
EES00358	Sorghum	cytosol	87.33	86.75
Os01t0136000-00	Rice	cytosol	86.0	86.58
Os01t0136100-01	Rice	cytosol, nucleus, plastid	86.0	86.0
Os01t0136200-01	Rice	cytosol, plastid	85.33	85.33
TraesCS3D01G045500.1	Wheat	cytosol	85.33	84.77
TraesCS3B01G049800.1	Wheat	cytosol	84.67	84.11
TraesCS3D01G046800.1	Wheat	cytosol	84.67	84.11
TraesCS3D01G046700.1	Wheat	cytosol	84.67	84.11
TraesCS3B01G049900.1	Wheat	cytosol	84.67	84.11
TraesCS3D01G045700.1	Wheat	cytosol	84.67	84.11
TraesCSU01G175200.1	Wheat	cytosol, golgi	84.0	83.44
TraesCS3A01G034500.1	Wheat	cytosol	84.0	83.44
TraesCS3D01G046300.1	Wheat	cytosol	83.33	82.78
TraesCS3D01G046600.1	Wheat	cytosol	83.33	82.78
TraesCSU01G164000.1	Wheat	cytosol	83.33	82.78
TraesCS3A01G034000.1	Wheat	cytosol	83.33	82.78
TraesCS5B01G245700.1	Wheat	cytosol	84.67	82.47
TraesCS3D01G045800.1	Wheat	cytosol	83.33	82.24
TraesCS3D01G045600.1	Wheat	cytosol	82.67	82.12
TraesCSU01G194600.1	Wheat	cytosol	82.67	82.12
TraesCS3A01G033900.1	Wheat	cytosol	82.67	82.12
EER95124	Sorghum	cytosol	76.67	72.78
EER95120	Sorghum	cytosol	74.67	70.89
KXG39718	Sorghum	cytosol	72.0	68.79
HORVU3Hr1G007380.1	Barley	mitochondrion	84.67	65.13
HORVU3Hr1G006530.1	Barley	cytosol	85.33	60.95
TraesCSU01G047300.1	Wheat	cytosol	83.33	60.68
HORVU3Hr1G007500.4	Barley	cytosol, plastid	84.67	58.8
EES02535	Sorghum	cytosol	51.33	51.33
HORVU2Hr1G120170.1	Barley	cytosol	82.67	50.0
EES02533	Sorghum	cytosol	47.33	43.03
EER89539	Sorghum	mitochondrion	35.33	35.81
EES04437	Sorghum	mitochondrion	42.0	34.43
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	48.67	33.8
EES08263	Sorghum	endoplasmic reticulum	45.33	32.85

Protein Annotations

EMBL:JX431287	EnsemblPlants:EES00359	EnsemblPlantsGene:SORBI_3003G082200	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF241	PFAM:PF00011
PFscan:PS01031	ProteinID:EES00359	ProteinID:EES00359.1	RefSeq:XP_002455239.1	SEG:seg	SUPFAM:SSF49764
unigene:Sbi.21226	UniParc:UPI0001A8478E	UniProt:C5XQS2	MapMan:19.1.8.1	:	:

Description

hypothetical protein

Coordinates

chr3:+:7057500..7058676

Molecular Weight (calculated)

17044.1 Da

IEP (calculated)

6.565

GRAVY (calculated)

-0.657

Length

150 amino acids

Sequence
(BLAST)

001: MSLVRRSTNV FDPFADFWDP FDVFRSIVPA ASTDRDTAAF ANARIDWKET PEAHVFKADV PGVKKEEVKV EVEDGNVLVI SGERRKEKED KDDKWHRVER
101: SSGRFMRRFR LPENAKTEEV KAGLENGVLT VTVPKAEVKK PEVKSVEIAG

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.