Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
26035336
plastid: 27992503 |
msms PMID:
26035336
doi
§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0136200-01 | Rice | cytosol, plastid | 99.33 | 99.33 |
| Os01t0136000-00 | Rice | cytosol | 94.0 | 94.63 |
| EES00358 | Sorghum | cytosol | 90.0 | 89.4 |
| EES02531 | Sorghum | cytosol | 88.67 | 87.5 |
| EES02532 | Sorghum | cytosol | 88.67 | 87.5 |
| Zm00001d039936_P001 | Maize | cytosol | 87.33 | 86.18 |
| EES00359 | Sorghum | cytosol | 86.0 | 86.0 |
| TraesCSU01G175200.1 | Wheat | cytosol, golgi | 84.67 | 84.11 |
| TraesCS3D01G045500.1 | Wheat | cytosol | 84.67 | 84.11 |
| TraesCS3B01G049800.1 | Wheat | cytosol | 84.67 | 84.11 |
| TraesCS3D01G046800.1 | Wheat | cytosol | 84.0 | 83.44 |
| TraesCS3D01G046700.1 | Wheat | cytosol | 84.0 | 83.44 |
| TraesCS3D01G045700.1 | Wheat | cytosol | 84.0 | 83.44 |
| TraesCS3B01G049900.1 | Wheat | cytosol | 84.0 | 83.44 |
| TraesCS3D01G046600.1 | Wheat | cytosol | 83.33 | 82.78 |
| TraesCS3D01G046300.1 | Wheat | cytosol | 83.33 | 82.78 |
| TraesCS3A01G034500.1 | Wheat | cytosol | 83.33 | 82.78 |
| TraesCS3D01G045800.1 | Wheat | cytosol | 83.33 | 82.24 |
| TraesCS3D01G045600.1 | Wheat | cytosol | 82.67 | 82.12 |
| TraesCSU01G164000.1 | Wheat | cytosol | 82.67 | 82.12 |
| TraesCS3A01G034000.1 | Wheat | cytosol | 82.67 | 82.12 |
| TraesCS5B01G245700.1 | Wheat | cytosol | 84.0 | 81.82 |
| TraesCS3A01G033900.1 | Wheat | cytosol | 82.0 | 81.46 |
| TraesCSU01G194600.1 | Wheat | cytosol | 82.0 | 81.46 |
| Os03t0266900-02 | Rice | cytosol | 76.0 | 74.03 |
| Os03t0267000-00 | Rice | cytosol, plastid | 76.0 | 70.81 |
| Os03t0266300-01 | Rice | nucleus, plasma membrane | 75.33 | 70.19 |
| Os03t0267200-01 | Rice | cytosol, plastid | 74.0 | 69.81 |
| HORVU3Hr1G007380.1 | Barley | mitochondrion | 84.67 | 65.13 |
| HORVU3Hr1G006530.1 | Barley | cytosol | 84.67 | 60.48 |
| TraesCSU01G047300.1 | Wheat | cytosol | 82.67 | 60.19 |
| HORVU3Hr1G007500.4 | Barley | cytosol, plastid | 83.33 | 57.87 |
| Os01t0135800-01 | Rice | cytosol | 54.67 | 54.67 |
| HORVU2Hr1G120170.1 | Barley | cytosol | 82.67 | 50.0 |
| Os01t0135900-02 | Rice | plasma membrane | 52.67 | 47.59 |
| Os06t0253100-01 | Rice | mitochondrion | 36.67 | 37.67 |
| Os02t0128000-00 | Rice | cytosol | 44.0 | 37.29 |
| Os11t0244200-01 | Rice | endoplasmic reticulum | 43.33 | 31.55 |
| Os04t0445100-01 | Rice | nucleus, plastid | 41.33 | 28.84 |
Protein Annotations
| MapMan:19.1.8.1 | Gene3D:2.60.40.790 | EntrezGene:4325697 | InterPro:A-crystallin/Hsp20_dom | ProteinID:AAA33909.1 | EMBL:AK242299 |
| ProteinID:BAB64126.1 | ProteinID:BAF03868.1 | ProteinID:BAS70263.1 | ProteinID:EAZ10446.1 | EMBL:EU846988 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 |
| GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0051259 | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | EnsemblPlantsGene:Os01g0136100 | EnsemblPlants:Os01t0136100-01 | UniProt:P27777 | PFAM:PF00011 |
| PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF241 | SUPFAM:SSF49764 | UniParc:UPI000000173B | EMBL:X60820 |
| RefSeq:XP_015625199.1 | SEG:seg | : | : | : | : |
Description
16.9 KDA CLASS I HEAT SHOCK PROTEIN 116.9 kDa class I heat shock protein 1. (Os01t0136100-01)
Coordinates
chr1:-:1948773..1949587
Molecular Weight (calculated)
16940.0 Da
IEP (calculated)
6.559
GRAVY (calculated)
-0.605
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVRRSNVF DPFSLDLWDP FDSVFRSVVP ATSDNDTAAF ANARIDWKET PESHVFKADL PGVKKEEVKV EVEEGNVLVI SGQRSKEKED KNDKWHRVER
101: SSGQFMRRFR LPENAKVDQV KAGLENGVLT VTVPKAEVKK PEVKAIEISG
101: SSGQFMRRFR LPENAKVDQV KAGLENGVLT VTVPKAEVKK PEVKAIEISG
001: MSMIPSFFNN NRRSNIFDPF SLDVWDPFKE LTSSSLSREN SAIVNARVDW RETPEAHVFK ADLPGLKKEE VKVEIEEDSV LKISGERHVE KEDKNDTWHR
101: VERSSGQFTR RFRLPENVKM DQVKAAMENG VLTVTVPKAE TKKADVKSIQ ISG
101: VERSSGQFTR RFRLPENVKM DQVKAAMENG VLTVTVPKAE TKKADVKSIQ ISG
Arabidopsis Description
HSP17.6B17.6 kDa class I heat shock protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW31]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.