Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 2
- peroxisome 3
- mitochondrion 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G37670.1 | Os08t0560900-01 | AT1G03130.1 | 21798944 |
| AT5G37670.1 | Os08t0412700-01 | AT1G13520.1 | 21798944 |
| AT5G37670.1 | Os08t0412800-01 | AT1G13520.1 | 21798944 |
| AT5G37670.1 | Os08t0413100-00 | AT1G13520.1 | 21798944 |
| AT5G37670.1 | Os08t0413200-00 | AT1G13520.1 | 21798944 |
| AT5G37670.1 | Os08t0413500-00 | AT1G13520.1 | 21798944 |
| AT5G37670.1 | Os01t0267900-01 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | Os01t0279300-01 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | Os01t0810300-01 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | Os03t0319300-01 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | Os05t0491000-01 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | Os05t0491100-01 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | Os07t0687200-02 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | Os12t0603800-00 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | Os08t0560900-01 | AT4G02770.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G205400.1 | Wheat | nucleus | 82.88 | 87.68 |
| TraesCS7B01G109100.1 | Wheat | mitochondrion, peroxisome | 82.19 | 86.96 |
| TraesCS7A01G202200.1 | Wheat | mitochondrion, peroxisome | 82.19 | 86.96 |
| EER89539 | Sorghum | mitochondrion | 72.6 | 71.62 |
| Zm00001d044728_P001 | Maize | mitochondrion | 70.55 | 70.55 |
| HORVU0Hr1G020420.1 | Barley | plastid | 82.19 | 70.18 |
| GSMUA_Achr9P27260_001 | Banana | peroxisome | 58.22 | 58.62 |
| PGSC0003DMT400060736 | Potato | mitochondrion | 50.0 | 50.34 |
| KRH72979 | Soybean | cytosol, mitochondrion, peroxisome | 49.32 | 50.0 |
| Solyc04g014480.2.1 | Tomato | mitochondrion | 48.63 | 48.97 |
| KRH17351 | Soybean | mitochondrion | 47.95 | 48.61 |
| VIT_13s0019g00860.t01 | Wine grape | cytosol | 47.26 | 48.59 |
| Bra028141.1-P | Field mustard | cytosol | 44.52 | 46.76 |
| CDY60723 | Canola | cytosol | 44.52 | 46.76 |
| CDY01718 | Canola | cytosol | 44.52 | 46.76 |
| AT5G37670.1 | Thale cress | cytosol | 43.84 | 46.72 |
| Os03t0266900-02 | Rice | cytosol | 41.1 | 38.96 |
| Os01t0135800-01 | Rice | cytosol | 38.36 | 37.33 |
| Os03t0267000-00 | Rice | cytosol, plastid | 41.1 | 37.27 |
| Os01t0136000-00 | Rice | cytosol | 37.67 | 36.91 |
| Os01t0136200-01 | Rice | cytosol, plastid | 37.67 | 36.67 |
| Os01t0136100-01 | Rice | cytosol, nucleus, plastid | 37.67 | 36.67 |
| Os03t0266300-01 | Rice | nucleus, plasma membrane | 40.41 | 36.65 |
| Os03t0267200-01 | Rice | cytosol, plastid | 39.73 | 36.48 |
| Os01t0135900-02 | Rice | plasma membrane | 28.08 | 24.7 |
| Os11t0244200-01 | Rice | endoplasmic reticulum | 34.25 | 24.27 |
| Os02t0128000-00 | Rice | cytosol | 28.77 | 23.73 |
| Os04t0445100-01 | Rice | nucleus, plastid | 32.19 | 21.86 |
Protein Annotations
| MapMan:19.1.8.10 | Gene3D:2.60.40.790 | EntrezGene:4340661 | InterPro:A-crystallin/Hsp20_dom | EMBL:AK105317 | ProteinID:BAD46159.1 |
| ProteinID:BAF19214.1 | ProteinID:BAS97071.1 | ProteinID:EAZ36507.1 | GO:GO:0000302 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005782 | GO:GO:0006457 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 | GO:GO:0009987 | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | EnsemblPlantsGene:Os06g0253100 | EnsemblPlants:Os06t0253100-01 | PFAM:PF00011 | PFscan:PS01031 |
| PANTHER:PTHR11527 | PANTHER:PTHR11527:SF142 | UniProt:Q652V8 | SUPFAM:SSF49764 | UniParc:UPI000043A4E0 | RefSeq:XP_015641984.1 |
| SEG:seg | : | : | : | : | : |
Description
HSP16.0Heat shock protein Hsp20 domain containing protein. (Os06t0253100-01)
Coordinates
chr6:-:7940956..7941680
Molecular Weight (calculated)
16024.2 Da
IEP (calculated)
9.137
GRAVY (calculated)
-0.292
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MADLFFGGPF RRILYGRPFP PDWASASATA AMDWVETPTS HVLRINVPGL GKDDVKVQVE DGNVLTVRGA APHAAAEKER EREKDVVWHV AERGRPEFAR
101: EVALPAEVRV EQIRASVDNG VLTVVVPKEP APARPRTRPI AVSSKL
101: EVALPAEVRV EQIRASVDNG VLTVVVPKEP APARPRTRPI AVSSKL
001: MADRGIFLYP FRRFQEWSRS TALIDWMESN NSHIFKINVP GYNKEDIKVQ IEEGNVLSIR GEGIKEEKKE NLVWHVAERE AFSGGGSEFL RRIELPENVK
101: VDQVKAYVEN GVLTVVVPKD TSSKSSKVRN VNITSKL
101: VDQVKAYVEN GVLTVVVPKD TSSKSSKVRN VNITSKL
Arabidopsis Description
HSP15.715.7 kDa heat shock protein, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.