Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039942_P001 | Maize | cytosol | 76.0 | 76.51 |
| TraesCS3D01G044400.1 | Wheat | cytosol | 78.0 | 75.48 |
| EES02535 | Sorghum | cytosol | 75.33 | 75.33 |
| TraesCS3B01G048600.1 | Wheat | cytosol | 76.0 | 74.03 |
| Os01t0136000-00 | Rice | cytosol | 56.0 | 56.38 |
| Os01t0136200-01 | Rice | cytosol, plastid | 55.33 | 55.33 |
| Os01t0136100-01 | Rice | cytosol, nucleus, plastid | 54.67 | 54.67 |
| Os03t0266900-02 | Rice | cytosol | 52.67 | 51.3 |
| Os03t0266300-01 | Rice | nucleus, plasma membrane | 52.67 | 49.07 |
| Os03t0267000-00 | Rice | cytosol, plastid | 52.0 | 48.45 |
| Os03t0267200-01 | Rice | cytosol, plastid | 51.33 | 48.43 |
| GSMUA_Achr1P21150_001 | Banana | cytosol | 45.33 | 41.98 |
| VIT_19s0085g01050.t01 | Wine grape | cytosol | 39.33 | 40.41 |
| Os06t0253100-01 | Rice | mitochondrion | 37.33 | 38.36 |
| Os02t0128000-00 | Rice | cytosol | 42.0 | 35.59 |
| Os01t0135900-02 | Rice | plasma membrane | 39.33 | 35.54 |
| KRH13798 | Soybean | cytosol | 37.33 | 33.33 |
| Os11t0244200-01 | Rice | endoplasmic reticulum | 44.0 | 32.04 |
| Os04t0445100-01 | Rice | nucleus, plastid | 42.67 | 29.77 |
| AT2G19310.1 | Thale cress | cytosol | 30.67 | 28.4 |
| CDY68135 | Canola | cytosol | 29.33 | 28.39 |
| KRH29724 | Soybean | cytosol, plastid | 28.0 | 28.38 |
| KRH24720 | Soybean | cytosol | 25.33 | 27.54 |
Protein Annotations
| Gene3D:2.60.40.790 | MapMan:35.1 | EntrezGene:4325694 | InterPro:A-crystallin/Hsp20_dom | EMBL:AK063681 | ProteinID:BAB64633.1 |
| ProteinID:BAF03865.1 | ProteinID:BAS70258.1 | ProteinID:EAZ10443.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 |
| GO:GO:0009644 | GO:GO:0042542 | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 |
| EnsemblPlantsGene:Os01g0135800 | EnsemblPlants:Os01t0135800-01 | PFAM:PF00011 | PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF190 |
| UniProt:Q943Q3 | SUPFAM:SSF49764 | UniParc:UPI00000AA880 | RefSeq:XP_015620983.1 | : | : |
Description
HSP16.6Similar to Cytosolic class I small heat shock protein 3B (Fragment). (Os01t0135800-01)
Coordinates
chr1:+:1934117..1934924
Molecular Weight (calculated)
16649.7 Da
IEP (calculated)
6.803
GRAVY (calculated)
-0.536
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVRSGNVL DPMSVDFWAD ADPFGAVRSL AERCPVLTNV RVDWKETPTA HVFTADLPGV RKDQAKVEVE DGGVLVISGE RAREEDVDGK NDERWHHVER
101: SSGKFQRRFR LPRGARVDQV SASMDNGVLT VTVPKEETKK PQLKAIPISG
101: SSGKFQRRFR LPRGARVDQV SASMDNGVLT VTVPKEETKK PQLKAIPISG
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Arabidopsis Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.