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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 5
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039942_P001 Maize cytosol 84.0 84.56
Os01t0135800-01 Rice cytosol 75.33 75.33
TraesCS3D01G044400.1 Wheat cytosol 69.33 67.1
TraesCS3B01G048600.1 Wheat cytosol 66.67 64.94
EES00358 Sorghum cytosol 53.33 52.98
EES02532 Sorghum cytosol 53.33 52.63
EES00359 Sorghum cytosol 51.33 51.33
EES02531 Sorghum cytosol 51.33 50.66
EER95124 Sorghum cytosol 52.67 50.0
KXG39718 Sorghum cytosol 52.0 49.68
EER95120 Sorghum cytosol 52.0 49.37
GSMUA_Achr1P21150_001 Banana cytosol 46.67 43.21
VIT_19s0085g01050.t01 Wine grape cytosol 40.67 41.78
EES02533 Sorghum cytosol 38.0 34.55
EES04437 Sorghum mitochondrion 40.0 32.79
KRH13798 Soybean cytosol 36.67 32.74
KXG26390 Sorghum endoplasmic reticulum, extracellular, golgi 46.0 31.94
EER89539 Sorghum mitochondrion 31.33 31.76
KRH24720 Soybean cytosol 28.67 31.16
KRH29724 Soybean cytosol, plastid 30.67 31.08
EES08263 Sorghum endoplasmic reticulum 42.67 30.92
AT2G19310.1 Thale cress cytosol 31.33 29.01
CDY68135 Canola cytosol 29.33 28.39
Protein Annotations
Gene3D:2.60.40.790MapMan:35.1EntrezGene:8061349InterPro:A-crystallin/Hsp20_domUniProt:C5XQS5EnsemblPlants:EES02535
ProteinID:EES02535ProteinID:EES02535.1GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0009408
GO:GO:0009628GO:GO:0009644GO:GO:0042542InterPro:HSP20InterPro:HSP20-like_chaperoneInterPro:IPR002068
InterPro:IPR008978PFAM:PF00011PFscan:PS01031PANTHER:PTHR11527PANTHER:PTHR11527:SF190EnsemblPlantsGene:SORBI_3003G082500
SUPFAM:SSF49764UniParc:UPI0001A84B65RefSeq:XP_002457415.1:::
Description
hypothetical protein
Coordinates
chr3:-:7078511..7079627
Molecular Weight (calculated)
16591.8 Da
IEP (calculated)
8.521
GRAVY (calculated)
-0.404
Length
150 amino acids
Sequence
(BLAST)
001: MSLVRSSNVF DPLSLDFWTS ADPLGVVRPL AEQCPVLTNV RVDWKETPEA HVFRADLPGV NKEAARVEVE DGNVLVISGE RNREELAGKG GEGAWRLVER
101: SSGKFQRRFR LPRGAKLDQV RASMDNGVLT VTVPKEDVKK PQVRAVEISG
Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Arabidopsis Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.