CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24720	Soybean	cytosol	79.73	85.51
KRH50105	Soybean	cytosol	41.89	40.52
KRH50107	Soybean	cytosol	40.54	39.22
KRH42102	Soybean	cytosol	39.86	38.56
KRH42103	Soybean	cytosol	39.86	38.56
KRH42105	Soybean	cytosol	39.86	38.56
KRH20397	Soybean	cytosol	39.86	38.31
KRH63973	Soybean	cytosol	36.49	38.3
KRH20405	Soybean	cytosol	39.19	38.16
KRH50102	Soybean	cytosol	39.19	37.91
KRH50109	Soybean	cytosol	39.19	37.91
KRH20400	Soybean	cytosol	39.19	37.66
KRH20402	Soybean	cytosol	38.51	37.01
KRH50104	Soybean	endoplasmic reticulum	39.86	36.65
KRH73111	Soybean	cytosol, endoplasmic reticulum, nucleus	37.84	36.6
KRH20403	Soybean	cytosol	38.51	35.4
KRH53964	Soybean	cytosol	35.81	35.33
KRH15020	Soybean	cytosol	37.84	35.22
KRH15019	Soybean	cytosol, endoplasmic reticulum	37.16	35.03
KRH75757	Soybean	cytosol	31.08	31.94
CDY68135	Canola	cytosol	33.11	31.61
Zm00001d039942_P001	Maize	cytosol	31.08	30.87
AT2G19310.1	Thale cress	cytosol	33.78	30.86
EES02535	Sorghum	cytosol	31.08	30.67
KRH50108	Soybean	cytosol, plastid	28.38	30.43
KRH57663	Soybean	cytosol	27.03	29.41
GSMUA_Achr1P21150_001	Banana	cytosol	31.08	28.4
Os01t0135800-01	Rice	cytosol	28.38	28.0
TraesCS3D01G044400.1	Wheat	cytosol	29.05	27.74
TraesCS3B01G048600.1	Wheat	cytosol	28.38	27.27
KRH17351	Soybean	mitochondrion	26.35	27.08
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	26.35	27.08
KRH00090	Soybean	cytosol	31.08	26.9
KRH49235	Soybean	cytosol	27.7	26.28
KRH70223	Soybean	cytosol, nucleus	27.03	26.14
KRH13798	Soybean	cytosol	28.38	25.0
KRH62434	Soybean	cytosol	25.68	24.2
KRH09251	Soybean	endoplasmic reticulum	29.73	22.34
KRG92477	Soybean	endoplasmic reticulum	28.38	21.88
KRH34328	Soybean	endoplasmic reticulum	28.38	21.54
KRG90262	Soybean	endoplasmic reticulum	27.7	21.03
KRG93360	Soybean	endoplasmic reticulum	27.03	20.3
KRH18614	Soybean	endoplasmic reticulum	27.03	20.2

Protein Annotations

EMBL:ACUP02006818	EnsemblPlants:KRH29724	EnsemblPlantsGene:GLYMA_11G134200	EntrezGene:100797426	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom
InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF174
PFAM:PF00011	PFscan:PS01031	ProteinID:KRH29724	ProteinID:KRH29724.1	SEG:seg	SUPFAM:SSF49764
UniParc:UPI0000E64A61	UniProt:I1LJW6	MapMan:19.1.8.4	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:10256189..10257197

Molecular Weight (calculated)

16381.3 Da

IEP (calculated)

4.895

GRAVY (calculated)

-0.249

Length

148 amino acids

Sequence
(BLAST)

001: MSIVPINQGD ANGSNPFASW GQFVDFPLPP SISGFFPGLE FGFGFGSSVN TRVDWRETPR AHVWKLVLPG FSNEDVLVEL QDERVLQVSV ESGNFVTRFK
101: VPDNGNLEQL KANMRHGVLV VTVPKFHQPT TTAPANRNVR EVEIEGTD

Best Arabidopsis Sequence Match ( AT2G19310.1 )
(BLAST)

001: MSMIPISNRR RLSPGDRIWE PFELMNTFLD FPSPALFLSH HFPSLSREIF PQTSSSTVNT QLNWTETPTA HVFKAYLPGV DQDEVIAFVD EEGYLQICTG
101: DNKFMSRFKL PNNALTDQVT AWMEDEFLVV FVEKDASSSP PQLPEIEENR NVRVVEITGD DD

Arabidopsis Description

HSP18.518.5 kDa class IV heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:O64564]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.