CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g05770.t01	Wine grape	cytosol	69.44	69.44
KRH20397	Soybean	cytosol	72.22	67.53
KRH53964	Soybean	cytosol	70.14	67.33
KRH20402	Soybean	cytosol	71.53	66.88
KRH50105	Soybean	cytosol	70.14	66.01
KRH42102	Soybean	cytosol	69.44	65.36
KRH50107	Soybean	cytosol	69.44	65.36
KRH42105	Soybean	cytosol	69.44	65.36
KRH42103	Soybean	cytosol	69.44	65.36
KRH50109	Soybean	cytosol	68.75	64.71
KRH20400	Soybean	cytosol	68.06	63.64
PGSC0003DMT400044066	Potato	cytosol	61.11	62.86
KRH50102	Soybean	cytosol	66.67	62.75
KRH20405	Soybean	cytosol	65.97	62.5
KRH50104	Soybean	endoplasmic reticulum	69.44	62.11
KRH57663	Soybean	cytosol	58.33	61.76
KRH15019	Soybean	cytosol, endoplasmic reticulum	66.67	61.15
KRH63973	Soybean	cytosol	59.72	60.99
KRH20403	Soybean	cytosol	68.06	60.87
KRH73111	Soybean	cytosol, endoplasmic reticulum, nucleus	63.89	60.13
KRH15020	Soybean	cytosol	65.97	59.75
KRH70223	Soybean	cytosol, nucleus	47.92	45.1
KRH50108	Soybean	cytosol, plastid	43.06	44.93
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	40.97	40.97
KRH49235	Soybean	cytosol	43.75	40.38
KRH17351	Soybean	mitochondrion	39.58	39.58
KRH62434	Soybean	cytosol	40.97	37.58
KRG92477	Soybean	endoplasmic reticulum	50.0	37.5
KRH34328	Soybean	endoplasmic reticulum	50.0	36.92
KRH00090	Soybean	cytosol	43.75	36.84
KRG93360	Soybean	endoplasmic reticulum	48.61	35.53
KRH18614	Soybean	endoplasmic reticulum	48.61	35.35
KRH13798	Soybean	cytosol	40.28	34.52
KRH09251	Soybean	endoplasmic reticulum	46.53	34.01
KRH24720	Soybean	cytosol	29.86	31.16
KRH29724	Soybean	cytosol, plastid	31.94	31.08
KRG90262	Soybean	endoplasmic reticulum	40.97	30.26

Protein Annotations

MapMan:19.1.8.1	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	EMBL:ACUP02000482	EnsemblPlantsGene:GLYMA_01G106800	InterPro:HSP20
InterPro:HSP20-like_chaperone	UniProt:I1J732	InterPro:IPR002068	InterPro:IPR008978	EnsemblPlants:KRH75757	ProteinID:KRH75757
ProteinID:KRH75757.1	PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF241	SUPFAM:SSF49764
UniParc:UPI00023373D7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:36419427..36421903

Molecular Weight (calculated)

16373.4 Da

IEP (calculated)

5.401

GRAVY (calculated)

-0.677

Length

144 amino acids

Sequence
(BLAST)

001: MSLIPSLLSN RNIMDPFSTN IWAPSDSDSE VSAFVNARVD WKETPESHVF KADLPGLKKE EVKVEVEEGR VLNISGERSV EKEDKNEKWH RVERGRGKFQ
101: RKFWLPEDAK VDEVKASMEN GVLTVIVPKV PDKKPEVKTI EISG

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.