CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73111	Soybean	cytosol, endoplasmic reticulum, nucleus	89.81	92.16
KRH50105	Soybean	cytosol	74.52	76.47
KRH50107	Soybean	cytosol	73.89	75.82
KRH42102	Soybean	cytosol	72.61	74.51
KRH42105	Soybean	cytosol	72.61	74.51
KRH50109	Soybean	cytosol	72.61	74.51
KRH53964	Soybean	cytosol	70.7	74.0
KRH42103	Soybean	cytosol	71.97	73.86
KRH50102	Soybean	cytosol	71.34	73.2
KRH20402	Soybean	cytosol	71.34	72.73
KRH20397	Soybean	cytosol	70.7	72.08
KRH15020	Soybean	cytosol	72.61	71.7
KRH20400	Soybean	cytosol	70.06	71.43
KRH20403	Soybean	cytosol	73.25	71.43
KRH50104	Soybean	endoplasmic reticulum	73.25	71.43
KRH63973	Soybean	cytosol	63.06	70.21
KRH20405	Soybean	cytosol	66.88	69.08
KRH57663	Soybean	cytosol	57.96	66.91
KRH75757	Soybean	cytosol	61.15	66.67
KRH70223	Soybean	cytosol, nucleus	47.13	48.37
KRH50108	Soybean	cytosol, plastid	40.76	46.38
KRH17351	Soybean	mitochondrion	40.76	44.44
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	40.13	43.75
KRH00090	Soybean	cytosol	44.59	40.94
KRG92477	Soybean	endoplasmic reticulum	48.41	39.58
KRH24720	Soybean	cytosol	34.39	39.13
KRH49235	Soybean	cytosol	38.85	39.1
KRH34328	Soybean	endoplasmic reticulum	48.41	38.97
KRH62434	Soybean	cytosol	38.22	38.22
KRH13798	Soybean	cytosol	40.76	38.1
KRG93360	Soybean	endoplasmic reticulum	47.77	38.07
KRH18614	Soybean	endoplasmic reticulum	47.13	37.37
KRH29724	Soybean	cytosol, plastid	35.03	37.16
KRH09251	Soybean	endoplasmic reticulum	44.59	35.53
KRG90262	Soybean	endoplasmic reticulum	40.76	32.82

Protein Annotations

EMBL:ACUP02008549	EMBL:BT091408	EnsemblPlants:KRH15019	EnsemblPlantsGene:GLYMA_14G063700	EntrezGene:100500475	Gene3D:2.60.40.790
InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527
PANTHER:PTHR11527:SF241	PFAM:PF00011	PFscan:PS01031	ProteinID:KRH15019	ProteinID:KRH15019.1	SEG:seg
SUPFAM:SSF49764	UniParc:UPI0001B14D9D	UniProt:C6T1V2	MapMan:19.1.8.1	:	:

Description

hypothetical protein

Coordinates

chr14:-:5170655..5171365

Molecular Weight (calculated)

17741.0 Da

IEP (calculated)

6.817

GRAVY (calculated)

-0.694

Length

157 amino acids

Sequence
(BLAST)

001: MSIIPNLFGG RRSNVFDPFS LDVWDPFEGF PFSTGHVPSS GGESSAIANT RVDWKETPAA HVFNVDLPGL KKEEVKVEVE DGRVLQISGE RTKEQEQKDD
101: RWHRVERSTG KFMRRFRLPE NAKMDQVKAA MENGVLTVTV PKEEDKKPQV KSIQISA

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.