CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50105	Soybean	cytosol	96.73	96.73
KRH50109	Soybean	cytosol	93.46	93.46
KRH20402	Soybean	cytosol	92.16	91.56
KRH50102	Soybean	cytosol	91.5	91.5
KRH20400	Soybean	cytosol	91.5	90.91
KRH20397	Soybean	cytosol	91.5	90.91
KRH42103	Soybean	cytosol	90.2	90.2
KRH42102	Soybean	cytosol	90.2	90.2
KRH42105	Soybean	cytosol	88.89	88.89
KRH50104	Soybean	endoplasmic reticulum	91.5	86.96
KRH53964	Soybean	cytosol	84.97	86.67
KRH20405	Soybean	cytosol	84.31	84.87
KRH20403	Soybean	cytosol	88.24	83.85
PGSC0003DMT400078008	Potato	cytosol	84.31	83.77
Solyc06g076570.1.1	Tomato	cytosol, extracellular, nucleus	83.01	82.47
KRH63973	Soybean	cytosol	75.82	82.27
PGSC0003DMT400078006	Potato	cytosol	82.35	81.82
PGSC0003DMT400038705	Potato	cytosol	70.59	81.2
Solyc06g076540.1.1	Tomato	cytosol, nucleus	81.7	81.17
PGSC0003DMT400078007	Potato	cytosol	81.05	80.52
Solyc06g076560.1.1	Tomato	cytosol, nucleus	80.39	79.87
PGSC0003DMT400078202	Potato	cytosol	80.39	79.87
Solyc06g076520.1.1	Tomato	cytosol, nucleus, plastid	79.08	78.57
PGSC0003DMT400078201	Potato	cytosol	79.08	78.57
AT2G29500.1	Thale cress	cytosol	75.82	75.82
CDY53371	Canola	cytosol	77.12	75.64
CDY45448	Canola	cytosol	77.12	75.64
KRH57663	Soybean	cytosol	66.67	75.0
Bra018383.1-P	Field mustard	cytosol	76.47	75.0
KRH15019	Soybean	cytosol, endoplasmic reticulum	75.82	73.89
CDX97881	Canola	cytosol	73.86	73.86
CDY51363	Canola	cytosol	73.2	73.68
KRH73111	Soybean	cytosol, endoplasmic reticulum, nucleus	73.2	73.2
KRH15020	Soybean	cytosol	75.82	72.96
AT1G59860.1	Thale cress	cytosol	73.86	72.9
AT1G07400.1	Thale cress	cytosol	73.2	71.34
KRH75757	Soybean	cytosol	65.36	69.44
CDY53372	Canola	cytosol, plastid	69.93	69.03
Bra018384.1-P	Field mustard	cytosol	70.59	67.92
Bra031725.1-P	Field mustard	cytosol	70.59	67.92
CDY45447	Canola	cytosol	70.59	67.92
KRH50108	Soybean	cytosol, plastid	43.79	48.55
KRH70223	Soybean	cytosol, nucleus	47.71	47.71
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	42.48	45.14
KRH17351	Soybean	mitochondrion	41.83	44.44
KRH24720	Soybean	cytosol	37.91	42.03
KRH00090	Soybean	cytosol	45.75	40.94
KRH29724	Soybean	cytosol, plastid	39.22	40.54
KRH49235	Soybean	cytosol	41.18	40.38
KRG92477	Soybean	endoplasmic reticulum	47.71	38.02
KRH13798	Soybean	cytosol	41.18	37.5
KRH34328	Soybean	endoplasmic reticulum	47.71	37.44
KRG93360	Soybean	endoplasmic reticulum	45.75	35.53
KRH62434	Soybean	cytosol	35.95	35.03
KRH18614	Soybean	endoplasmic reticulum	45.1	34.85
KRH09251	Soybean	endoplasmic reticulum	44.44	34.52
KRG90262	Soybean	endoplasmic reticulum	40.52	31.79

Protein Annotations

EntrezGene:100791172	MapMan:19.1.8.1	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	UniProt:A0A0R0JD60	ProteinID:AAB03893.1
EnsemblPlantsGene:GLYMA_07G200500	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	EnsemblPlants:KRH50107	ProteinID:KRH50107	ProteinID:KRH50107.1
UniProt:P04793	PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF190	SUPFAM:SSF49764
UniParc:UPI0000044D59	SEG:seg	:	:	:	:

Description

HSP17.5-Mhypothetical protein

Coordinates

chr7:+:36891681..36892736

Molecular Weight (calculated)

17546.7 Da

IEP (calculated)

5.123

GRAVY (calculated)

-0.654

Length

153 amino acids

Sequence
(BLAST)

001: MSLIPSIFGG RRSNVFDPFS LDVWDPFKDF HFPTSLSAEN SAFVNTRVDW KETPEAHVFE ADIPGLKKEE VKVQIEDDRV LQISGERNLE KEDKNDTWHR
101: VERSSGNFMR RFRLPENAKV EQVKASMENG VLTVTVPKEE VKKPDVKAIE ISG

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.