CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50104	Soybean	endoplasmic reticulum	92.11	86.96
KRH20402	Soybean	cytosol	87.5	86.36
KRH20403	Soybean	cytosol	90.79	85.71
KRH20397	Soybean	cytosol	86.84	85.71
KRH50102	Soybean	cytosol	85.53	84.97
KRH50107	Soybean	cytosol	84.87	84.31
KRH50105	Soybean	cytosol	84.21	83.66
KRH42102	Soybean	cytosol	83.55	83.01
KRH50109	Soybean	cytosol	83.55	83.01
KRH20400	Soybean	cytosol	82.89	81.82
KRH42103	Soybean	cytosol	82.24	81.7
KRH42105	Soybean	cytosol	81.58	81.05
KRH53964	Soybean	cytosol	78.29	79.33
PGSC0003DMT400078008	Potato	cytosol	78.95	77.92
Solyc06g076570.1.1	Tomato	cytosol, extracellular, nucleus	77.63	76.62
PGSC0003DMT400078006	Potato	cytosol	77.63	76.62
PGSC0003DMT400078007	Potato	cytosol	76.97	75.97
Solyc06g076540.1.1	Tomato	cytosol, nucleus	76.97	75.97
PGSC0003DMT400038705	Potato	cytosol	65.79	75.19
KRH63973	Soybean	cytosol	69.74	75.18
PGSC0003DMT400078202	Potato	cytosol	75.0	74.03
Solyc06g076560.1.1	Tomato	cytosol, nucleus	75.0	74.03
PGSC0003DMT400078201	Potato	cytosol	74.34	73.38
Solyc06g076520.1.1	Tomato	cytosol, nucleus, plastid	73.68	72.73
CDY53371	Canola	cytosol	72.37	70.51
CDY45448	Canola	cytosol	72.37	70.51
AT2G29500.1	Thale cress	cytosol	70.39	69.93
Bra018383.1-P	Field mustard	cytosol	71.71	69.87
CDX97881	Canola	cytosol	69.08	68.63
CDY51363	Canola	cytosol	67.76	67.76
KRH57663	Soybean	cytosol	60.53	67.65
KRH15019	Soybean	cytosol, endoplasmic reticulum	69.08	66.88
AT1G59860.1	Thale cress	cytosol	67.76	66.45
KRH73111	Soybean	cytosol, endoplasmic reticulum, nucleus	66.45	66.01
KRH75757	Soybean	cytosol	62.5	65.97
KRH15020	Soybean	cytosol	68.42	65.41
AT1G07400.1	Thale cress	cytosol	67.11	64.97
CDY53372	Canola	cytosol, plastid	65.79	64.52
Bra031725.1-P	Field mustard	cytosol	66.45	63.52
Bra018384.1-P	Field mustard	cytosol	66.45	63.52
CDY45447	Canola	cytosol	65.79	62.89
KRH50108	Soybean	cytosol, plastid	43.42	47.83
KRH70223	Soybean	cytosol, nucleus	45.39	45.1
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	40.79	43.06
KRH17351	Soybean	mitochondrion	40.13	42.36
KRH24720	Soybean	cytosol	36.18	39.86
KRH49235	Soybean	cytosol	40.79	39.74
KRH29724	Soybean	cytosol, plastid	38.16	39.19
KRH00090	Soybean	cytosol	43.42	38.6
KRH62434	Soybean	cytosol	38.16	36.94
KRG92477	Soybean	endoplasmic reticulum	46.05	36.46
KRH34328	Soybean	endoplasmic reticulum	46.05	35.9
KRH13798	Soybean	cytosol	38.82	35.12
KRH09251	Soybean	endoplasmic reticulum	42.76	32.99
KRG93360	Soybean	endoplasmic reticulum	42.76	32.99
KRH18614	Soybean	endoplasmic reticulum	42.11	32.32
KRG90262	Soybean	endoplasmic reticulum	37.5	29.23

Protein Annotations

EMBL:ACUP02008262	EnsemblPlants:KRH20405	EnsemblPlantsGene:GLYMA_13G176500	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF190	PFAM:PF00011
PFscan:PS01031	ProteinID:KRH20405	ProteinID:KRH20405.1	SUPFAM:SSF49764	UniParc:UPI0001D62D39	UniProt:A0A0R0GZI4
MapMan:19.1.8.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:29063120..29064174

Molecular Weight (calculated)

17394.5 Da

IEP (calculated)

7.793

GRAVY (calculated)

-0.727

Length

152 amino acids

Sequence
(BLAST)

001: MSLIPNIFGG RRSNVFDPFK DFPFPNSVST SFPEFSRENS AFVSTRVDWK ETPEAHVFKA DIPGLKKEEV KVQIEDDKVL QISGERNVEN EDKNDTWHRV
101: ERSSGKFMRR FRLPENAKVN EVKASMENGV LTVTVPKKEV KNHDVKAIEI SG

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.