CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 9
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92477	Soybean	endoplasmic reticulum	91.28	92.71
KRH09251	Soybean	endoplasmic reticulum	76.92	76.14
VIT_18s0089g01270.t01	Wine grape	endoplasmic reticulum	65.64	68.82
KRG90262	Soybean	endoplasmic reticulum	67.18	67.18
CDX93767	Canola	endoplasmic reticulum, extracellular, golgi	57.95	65.7
Bra027999.1-P	Field mustard	extracellular	57.44	65.12
CDX86006	Canola	extracellular	56.92	64.53
CDY05088	Canola	cytosol	62.56	61.93
AT4G10250.1	Thale cress	endoplasmic reticulum	61.54	61.54
CDX90748	Canola	extracellular	62.05	61.42
Bra000703.1-P	Field mustard	extracellular	62.05	61.42
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	62.56	61.0
PGSC0003DMT400023932	Potato	endoplasmic reticulum	55.38	54.82
Solyc11g020330.1.1	Tomato	plastid	53.33	54.74
KRH75757	Soybean	cytosol	36.92	50.0
KRH53964	Soybean	cytosol	37.95	49.33
KRH42102	Soybean	cytosol	38.46	49.02
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	53.85	48.61
Zm00001d003554_P001	Maize	endoplasmic reticulum, golgi	51.79	48.56
KRH15019	Soybean	cytosol, endoplasmic reticulum	38.97	48.41
KRH42103	Soybean	cytosol	37.95	48.37
KRH50105	Soybean	cytosol	37.95	48.37
KRH50102	Soybean	cytosol	37.95	48.37
KRH42105	Soybean	cytosol	37.95	48.37
KRH20402	Soybean	cytosol	37.95	48.05
KRH20397	Soybean	cytosol	37.95	48.05
KRH50107	Soybean	cytosol	37.44	47.71
KRH50109	Soybean	cytosol	37.44	47.71
KRH63973	Soybean	cytosol	34.36	47.52
KRH20400	Soybean	cytosol	37.44	47.4
KRH73111	Soybean	cytosol, endoplasmic reticulum, nucleus	36.92	47.06
KRH15020	Soybean	cytosol	37.95	46.54
KRH20405	Soybean	cytosol	35.9	46.05
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	51.28	45.66
KRH57663	Soybean	cytosol	31.79	45.59
KRH50104	Soybean	endoplasmic reticulum	37.44	45.34
TraesCS2D01G311400.1	Wheat	endoplasmic reticulum, golgi	50.77	45.21
Zm00001d025508_P001	Maize	extracellular	50.26	45.16
Os04t0445100-01	Rice	nucleus, plastid	49.74	45.12
KRH20403	Soybean	cytosol	36.92	44.72
KRH18614	Soybean	endoplasmic reticulum	44.62	43.94
KRG93360	Soybean	endoplasmic reticulum	43.59	43.15
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	49.23	41.92
KRH50108	Soybean	cytosol, plastid	27.18	38.41
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	26.15	35.42
KRH17351	Soybean	mitochondrion	26.15	35.42
KRH70223	Soybean	cytosol, nucleus	27.69	35.29
KRH49235	Soybean	cytosol	27.18	33.97
KRH13798	Soybean	cytosol	28.72	33.33
KRH00090	Soybean	cytosol	27.69	31.58
KRH62434	Soybean	cytosol	23.08	28.66
KRH29724	Soybean	cytosol, plastid	21.54	28.38
KRH24720	Soybean	cytosol	19.49	27.54

Protein Annotations

MapMan:19.1.8.12	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	EMBL:ACUP02006589	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G176400
InterPro:HSP20	InterPro:HSP20-like_chaperone	UniProt:I1LC12	InterPro:IPR002068	InterPro:IPR008978	EnsemblPlants:KRH34328
ProteinID:KRH34328	ProteinID:KRH34328.1	PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF135
SUPFAM:SSF49764	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00023CD5E6	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:41005499..41006656

Molecular Weight (calculated)

22386.0 Da

IEP (calculated)

5.811

GRAVY (calculated)

-0.508

Length

195 amino acids

Sequence
(BLAST)

001: MRLPQLNLFL VSFLLLFVAR ANGSLLPFID PPTTLLADLW SDRFPDPFRV LEQIPFGVDK DEPSMAMSPA RVDWKETPEG HVIMLDVPGL KREEIKIEVE
101: ENRVLRVSGE RKKEEEKKGD HWHRVERSYG KFWRQFRLPQ NVDLDSVKAK MENGVLTLTL DKLSPDKIKG PRLVSIAGED QQQGNLNSDG VKQEL

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.