CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
endoplasmic reticulum 7
extracellular 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000703.1-P	Field mustard	extracellular	100.0	100.0
CDY05088	Canola	cytosol	97.97	97.97
AT4G10250.1	Thale cress	endoplasmic reticulum	90.36	91.28
CDX86006	Canola	extracellular	61.93	70.93
CDX93767	Canola	endoplasmic reticulum, extracellular, golgi	60.41	69.19
KRH34328	Soybean	endoplasmic reticulum	61.42	62.05
KRG92477	Soybean	endoplasmic reticulum	59.9	61.46
KRH09251	Soybean	endoplasmic reticulum	60.41	60.41
VIT_18s0089g01270.t01	Wine grape	endoplasmic reticulum	56.85	60.22
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	59.9	59.0
KRG90262	Soybean	endoplasmic reticulum	54.31	54.87
PGSC0003DMT400023932	Potato	endoplasmic reticulum	51.27	51.27
Solyc11g020330.1.1	Tomato	plastid	49.24	51.05
CDY60563	Canola	cytosol	36.55	47.37
CDY51363	Canola	cytosol	35.53	46.05
CDY56096	Canola	cytosol	35.53	46.05
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	50.25	45.83
CDX97881	Canola	cytosol	35.53	45.75
Zm00001d003554_P001	Maize	endoplasmic reticulum, golgi	48.22	45.67
CDY53372	Canola	cytosol, plastid	35.53	45.16
CDY49575	Canola	plastid	36.04	44.38
Zm00001d025508_P001	Maize	extracellular	48.73	44.24
CDY45447	Canola	cytosol	35.53	44.03
TraesCS2D01G311400.1	Wheat	endoplasmic reticulum, golgi	48.73	43.84
CDX71079	Canola	cytosol	35.53	43.75
CDX88719	Canola	cytosol	35.53	43.75
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	48.22	43.38
CDY53371	Canola	cytosol	33.5	42.31
CDY45448	Canola	cytosol	33.5	42.31
Os04t0445100-01	Rice	nucleus, plastid	45.69	41.86
CDX99119	Canola	cytosol	32.99	41.4
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	47.72	41.05
CDX86069	Canola	cytosol	32.49	40.76
CDY60723	Canola	cytosol	25.38	35.97
CDY01718	Canola	cytosol	24.37	34.53
CDY68135	Canola	cytosol	18.78	23.87

Protein Annotations

EnsemblPlants:CDX90748	EnsemblPlantsGene:GSBRNA2T00151440001	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF135	PFAM:PF00011	PFscan:PS01031
ProteinID:CDX90748	ProteinID:CDX90748.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49764	UniParc:UPI0001D62E05
MapMan:19.1.8.12	:	:	:	:	:

Description

BnaA03g24280D

Coordinates

chrLK031864:+:301481..302074

Molecular Weight (calculated)

22291.7 Da

IEP (calculated)

5.229

GRAVY (calculated)

-0.523

Length

197 amino acids

Sequence
(BLAST)

001: MKHLPYFPLL SLFVGALILG NTKPSEGSLS SAIDTPGSLL SDLWLDRFPD PFKILERIPL ELERDQSVAL SPARVDWKET AEGHEIMLDV PGLKKDEVKI
101: EVEENRVLSV SGERKREEEK KGDQWHRVER SYGKFWRQFK LPDNVDMESV KAKLENGVLT INLTKLAPEK VKGPRVVNIA AEEDQTAKIS SSESKEL

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.