Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G19310.1 | Thale cress | cytosol | 80.0 | 76.54 |
| CDY51363 | Canola | cytosol | 34.84 | 35.53 |
| KRH24720 | Soybean | cytosol | 31.61 | 35.51 |
| CDX97881 | Canola | cytosol | 34.84 | 35.29 |
| CDY53371 | Canola | cytosol | 34.84 | 34.62 |
| CDX99119 | Canola | cytosol | 34.84 | 34.39 |
| CDX71079 | Canola | cytosol | 35.48 | 34.38 |
| CDY60563 | Canola | cytosol | 33.55 | 34.21 |
| CDY56096 | Canola | cytosol | 33.55 | 34.21 |
| CDY53372 | Canola | cytosol, plastid | 34.19 | 34.19 |
| CDY45448 | Canola | cytosol | 34.19 | 33.97 |
| CDY49575 | Canola | plastid | 34.84 | 33.75 |
| CDX88719 | Canola | cytosol | 34.84 | 33.75 |
| CDY45447 | Canola | cytosol | 34.19 | 33.33 |
| CDX86069 | Canola | cytosol | 33.55 | 33.12 |
| KRH29724 | Soybean | cytosol, plastid | 31.61 | 33.11 |
| Zm00001d039942_P001 | Maize | cytosol | 29.68 | 30.87 |
| GSMUA_Achr1P21150_001 | Banana | cytosol | 30.97 | 29.63 |
| EES02535 | Sorghum | cytosol | 28.39 | 29.33 |
| Os01t0135800-01 | Rice | cytosol | 28.39 | 29.33 |
| TraesCS3B01G048600.1 | Wheat | cytosol | 27.74 | 27.92 |
| TraesCS3D01G044400.1 | Wheat | cytosol | 27.74 | 27.74 |
| CDY60723 | Canola | cytosol | 21.94 | 24.46 |
| CDY01718 | Canola | cytosol | 20.65 | 23.02 |
| CDX93767 | Canola | endoplasmic reticulum, extracellular, golgi | 21.29 | 19.19 |
| CDY05088 | Canola | cytosol | 23.87 | 18.78 |
| CDX90748 | Canola | extracellular | 23.87 | 18.78 |
| CDX86006 | Canola | extracellular | 20.65 | 18.6 |
Protein Annotations
| EnsemblPlants:CDY68135 | EnsemblPlantsGene:GSBRNA2T00069948001 | Gene3D:2.60.40.790 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| GO:GO:0009408 | GO:GO:0009628 | GO:GO:0009644 | GO:GO:0042542 | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF184 | ProteinID:CDY68135 | ProteinID:CDY68135.1 | SUPFAM:SSF49764 |
| UniParc:UPI0004EEB985 | UniProt:A0A078JNT5 | MapMan:35.1 | : | : | : |
Description
BnaAnng26270D18.5 kDa class IV heat shock protein [Source:Projected from Arabidopsis thaliana (AT2G19310) UniProtKB/Swiss-Prot;Acc:O64564]
Coordinates
chrLK036891:+:4678..5319
Molecular Weight (calculated)
17711.7 Da
IEP (calculated)
4.038
GRAVY (calculated)
-0.325
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIIPINDRR SISPEDRIWE PFELMNTFFD FPSPSLLLPR HFPSLSSPST VETQLYWTET PTAHVFKAYL PGTTQDEAIV FVDDEGYLQI CAGDNKFMSR
101: FKLPDNALKD QVTAWMEEDA FLVVFVAKDG TFSQTPPEIE DNRNVRVVEI TGDDD
101: FKLPDNALKD QVTAWMEEDA FLVVFVAKDG TFSQTPPEIE DNRNVRVVEI TGDDD
001: MSMIPISNRR RLSPGDRIWE PFELMNTFLD FPSPALFLSH HFPSLSREIF PQTSSSTVNT QLNWTETPTA HVFKAYLPGV DQDEVIAFVD EEGYLQICTG
101: DNKFMSRFKL PNNALTDQVT AWMEDEFLVV FVEKDASSSP PQLPEIEENR NVRVVEITGD DD
101: DNKFMSRFKL PNNALTDQVT AWMEDEFLVV FVEKDASSSP PQLPEIEENR NVRVVEITGD DD
Arabidopsis Description
HSP18.518.5 kDa class IV heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:O64564]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.