Factsheet for Os04t0445100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

extracellular 6
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

nucleus: 26035336
plastid: 27992503

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003554_P001	Maize	endoplasmic reticulum, golgi	74.42	76.92
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	73.95	73.61
Zm00001d025508_P001	Maize	extracellular	72.56	71.89
TraesCS2D01G311400.1	Wheat	endoplasmic reticulum, golgi	73.02	71.69
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	73.02	71.69
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	72.56	68.12
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	50.23	54.0
KRG92477	Soybean	endoplasmic reticulum	46.98	52.6
CDX86006	Canola	extracellular	41.86	52.33
Bra027999.1-P	Field mustard	extracellular	41.4	51.74
CDX93767	Canola	endoplasmic reticulum, extracellular, golgi	40.93	51.16
KRH34328	Soybean	endoplasmic reticulum	45.12	49.74
KRH09251	Soybean	endoplasmic reticulum	45.12	49.24
VIT_18s0089g01270.t01	Wine grape	endoplasmic reticulum	42.33	48.92
CDY05088	Canola	cytosol	42.33	46.19
Bra000703.1-P	Field mustard	extracellular	41.86	45.69
CDX90748	Canola	extracellular	41.86	45.69
Solyc11g020330.1.1	Tomato	plastid	40.0	45.26
AT4G10250.1	Thale cress	endoplasmic reticulum	40.93	45.13
PGSC0003DMT400023932	Potato	endoplasmic reticulum	39.53	43.15
Os03t0266900-02	Rice	cytosol	30.7	42.86
Os01t0135800-01	Rice	cytosol	29.77	42.67
Os01t0136000-00	Rice	cytosol	29.3	42.28
KRG90262	Soybean	endoplasmic reticulum	38.14	42.05
Os11t0244200-01	Rice	endoplasmic reticulum	40.0	41.75
Os01t0136100-01	Rice	cytosol, nucleus, plastid	28.84	41.33
Os03t0266300-01	Rice	nucleus, plasma membrane	30.7	40.99
Os01t0136200-01	Rice	cytosol, plastid	28.37	40.67
Os03t0267000-00	Rice	cytosol, plastid	30.23	40.37
Os03t0267200-01	Rice	cytosol, plastid	29.77	40.25
Os02t0128000-00	Rice	cytosol	28.37	34.46
Os06t0253100-01	Rice	mitochondrion	21.86	32.19
Os01t0135900-02	Rice	plasma membrane	22.79	29.52

Protein Annotations

MapMan:19.1.8.12	Gene3D:2.60.40.790	EntrezGene:4335956	InterPro:A-crystallin/Hsp20_dom	EMBL:AK063700	ProteinID:BAF14813.1
ProteinID:BAS89386.1	ProteinID:CAD40969.2	ProteinID:EAZ30866.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	EnsemblPlantsGene:Os04g0445100	EnsemblPlants:Os04t0445100-01
PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF135	UniProt:Q7XUW5	SUPFAM:SSF49764
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00001B1280	RefSeq:XP_015633704.1	SEG:seg	:

Description

HSP23.2Similar to 22.7 kDa class IV heat shock protein precursor. (Os04t0445100-01)

Coordinates

chr4:+:22200999..22201929

Molecular Weight (calculated)

23229.5 Da

IEP (calculated)

5.184

GRAVY (calculated)

-0.365

Length

215 amino acids

Sequence
(BLAST)

001: MASMRTAAAA AMLACIAVVL ASTAADGALL PWFGGGGARD EAVPELGLLA AADPFRILEH VPFGFDRDDV AMLSMARVDW RETGDAHEVV VDVPGMRKED
101: LRVEVEDNRV LRISGERRRE ETTEQKGGGD HWHREERSYG RFWRQLRLPD NADLDSIAAS LDNGVLTVRF RKLAPDQIKG PRVVGIASAG GDDGGKKSIG
201: GAGEGQNQQA KKVEL

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.