Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02533 | Sorghum | cytosol | 70.48 | 70.91 |
| Zm00001d039941_P001 | Maize | cytosol | 68.07 | 68.07 |
| HORVU3Hr1G006930.1 | Barley | cytosol | 67.47 | 67.88 |
| TraesCS3B01G048700.1 | Wheat | cytosol | 66.27 | 67.07 |
| TraesCS3A01G035400.1 | Wheat | cytosol | 66.27 | 66.67 |
| TraesCS3B01G048800.1 | Wheat | cytosol | 65.66 | 66.06 |
| Os01t0136200-01 | Rice | cytosol, plastid | 48.19 | 53.33 |
| Os01t0136100-01 | Rice | cytosol, nucleus, plastid | 47.59 | 52.67 |
| TraesCS3A01G035500.1 | Wheat | mitochondrion, plastid | 65.66 | 52.4 |
| Os01t0136000-00 | Rice | cytosol | 46.99 | 52.35 |
| Os03t0266900-02 | Rice | cytosol | 40.36 | 43.51 |
| Os03t0266300-01 | Rice | nucleus, plasma membrane | 42.17 | 43.48 |
| Os03t0267000-00 | Rice | cytosol, plastid | 40.96 | 42.24 |
| Os03t0267200-01 | Rice | cytosol, plastid | 40.36 | 42.14 |
| GSMUA_Achr9P03540_001 | Banana | cytosol | 39.76 | 41.25 |
| HORVU3Hr1G006940.2 | Barley | cytosol | 59.64 | 40.74 |
| VIT_13s0019g03170.t01 | Wine grape | cytosol | 38.55 | 40.25 |
| GSMUA_Achr6P33860_001 | Banana | cytosol | 39.76 | 40.0 |
| Os01t0135800-01 | Rice | cytosol | 35.54 | 39.33 |
| GSMUA_Achr7P14910_001 | Banana | cytosol | 36.14 | 35.71 |
| GSMUA_Achr8P00290_001 | Banana | cytosol | 29.52 | 33.79 |
| KRH49235 | Soybean | cytosol | 31.33 | 33.33 |
| KRH00090 | Soybean | cytosol | 33.73 | 32.75 |
| Os02t0128000-00 | Rice | cytosol | 32.53 | 30.51 |
| Os06t0253100-01 | Rice | mitochondrion | 24.7 | 28.08 |
| KRH62434 | Soybean | cytosol | 25.9 | 27.39 |
| PGSC0003DMT400049226 | Potato | cytosol | 30.72 | 26.15 |
| Os11t0244200-01 | Rice | endoplasmic reticulum | 31.93 | 25.73 |
| Solyc09g011710.2.1 | Tomato | cytosol | 31.33 | 25.0 |
| PGSC0003DMT400030603 | Potato | cytosol | 28.92 | 24.87 |
| Os04t0445100-01 | Rice | nucleus, plastid | 29.52 | 22.79 |
| PGSC0003DMT400049225 | Potato | mitochondrion | 30.72 | 21.79 |
| Solyc10g086680.1.1 | Tomato | mitochondrion | 30.12 | 21.37 |
Protein Annotations
| Gene3D:2.60.40.790 | MapMan:35.1 | EntrezGene:4325695 | InterPro:A-crystallin/Hsp20_dom | EMBL:AK065690 | EMBL:AK119599 |
| ProteinID:BAB64123.1 | ProteinID:BAF03866.2 | ProteinID:BAS70259.1 | UniProt:E5D3J6 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | EMBL:GU120337 | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 |
| InterPro:IPR008978 | EnsemblPlantsGene:Os01g0135900 | EnsemblPlants:Os01t0135900-02 | PFAM:PF00011 | PFscan:PS01031 | PANTHER:PTHR11527 |
| PANTHER:PTHR11527:SF141 | UniProt:Q943E9 | SUPFAM:SSF49764 | UniParc:UPI000009E90C | RefSeq:XP_015624472.1 | SEG:seg |
Description
17.9 KDA HEAT SHOCK PROTEIN 2Similar to Cytosolic class I small heat shock protein 3C (Fragment). (Os01t0135900-01);LMW heat shock protein. (Os01t0135900-02)
Coordinates
chr1:+:1941012..1941845
Molecular Weight (calculated)
17893.2 Da
IEP (calculated)
4.718
GRAVY (calculated)
0.051
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVKLFDTL AFDAWNPFSI FGTTVAADAW LASDTSAFAN TYIESRETAE AYVFRADLPA GVKKEEVRVE VDEGNVLVIT GERSVRREEK GQRSHHIERS
101: CATFFGRFHL PDDAVVDLVR ASMDGGMLTV TVPKVVTDKQ PAIAAAAPVP AVVAPAVEAK AIEASP
101: CATFFGRFHL PDDAVVDLVR ASMDGGMLTV TVPKVVTDKQ PAIAAAAPVP AVVAPAVEAK AIEASP
001: MSLIPSIFGG RRTNVFDPFS LDVFDPFEGF LTPSGLANAP AMDVAAFTNA KVDWRETPEA HVFKADLPGL RKEEVKVEVE DGNILQISGE RSNENEEKND
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG
Arabidopsis Description
HSP17.6C17.6 kDa class I heat shock protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P13853]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.