Factsheet for TraesCS3A01G035400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G048800.1	Wheat	cytosol	92.12	92.12
HORVU3Hr1G006930.1	Barley	cytosol	90.3	90.3
TraesCS3A01G035500.1	Wheat	mitochondrion, plastid	90.91	72.12
Os01t0135900-02	Rice	plasma membrane	66.67	66.27
EES02533	Sorghum	cytosol	63.03	63.03
Zm00001d039941_P001	Maize	cytosol	61.82	61.45
HORVU3Hr1G006940.2	Barley	cytosol	78.79	53.5
TraesCS3A01G033900.1	Wheat	cytosol	40.61	44.37
TraesCS3A01G034500.1	Wheat	cytosol	40.61	44.37
TraesCS3A01G034000.1	Wheat	cytosol	40.61	44.37
TraesCS4A01G092200.1	Wheat	cytosol	40.0	43.71
TraesCS4A01G092600.1	Wheat	cytosol	40.61	43.23
TraesCS4A01G092900.1	Wheat	cytosol	41.21	43.04
TraesCS4A01G092800.1	Wheat	cytosol	41.21	43.04
TraesCS4A01G092700.1	Wheat	cytosol	40.0	42.58
TraesCS4A01G092100.1	Wheat	cytosol	40.0	41.77
GSMUA_Achr6P33860_001	Banana	cytosol	41.21	41.21
GSMUA_Achr9P03540_001	Banana	cytosol	39.39	40.62
VIT_13s0019g03170.t01	Wine grape	cytosol	37.58	38.99
GSMUA_Achr7P14910_001	Banana	cytosol	34.55	33.93
TraesCS7A01G183800.1	Wheat	cytosol	31.52	33.55
GSMUA_Achr8P00290_001	Banana	cytosol	27.88	31.72
KRH49235	Soybean	cytosol	25.45	26.92
TraesCS7A01G202200.1	Wheat	mitochondrion, peroxisome	21.82	26.09
KRH00090	Soybean	cytosol	26.67	25.73
PGSC0003DMT400049226	Potato	cytosol	29.7	25.13
KRH62434	Soybean	cytosol	23.03	24.2
TraesCS6A01G087600.1	Wheat	cytosol	26.67	23.78
Solyc09g011710.2.1	Tomato	cytosol	29.09	23.08
PGSC0003DMT400030603	Potato	cytosol	26.67	22.8
PGSC0003DMT400049225	Potato	mitochondrion	30.3	21.37
Solyc10g086680.1.1	Tomato	mitochondrion	30.3	21.37
TraesCS2A01G312900.1	Wheat	endoplasmic reticulum, golgi	27.88	21.0
TraesCS4A01G226700.1	Wheat	plastid	29.09	19.35

Protein Annotations

EnsemblPlants:TraesCS3A01G035400.1	EnsemblPlantsGene:TraesCS3A01G035400	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF141	PFAM:PF00011	PFscan:PS01031
SEG:seg	SUPFAM:SSF49764	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3A:+:19559672..19560169

Molecular Weight (calculated)

17662.7 Da

IEP (calculated)

4.451

GRAVY (calculated)

0.000

Length

165 amino acids

Sequence
(BLAST)

001: MSLVRFFDTL ALDSWNPFGS IFGTTASSGT DAWLASDTTA FADTYIESRE TAEAYVFSAR LPAGVTKEEV KVEVEEEGKV LVIAGERNLR REAKSETRHH
101: VERSVATFFG RFHLPDDAAL GQVRAAMDDG GAQLIVTVPR AGVAVAAVTM PEPAVAIEVG EASPC

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.