Factsheet for Solyc10g086680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049225	Potato	mitochondrion	88.03	88.03
Solyc09g011710.2.1	Tomato	cytosol	42.31	47.6
Solyc06g076570.1.1	Tomato	cytosol, extracellular, nucleus	29.06	44.16
Solyc06g076560.1.1	Tomato	cytosol, nucleus	29.06	44.16
Solyc06g076520.1.1	Tomato	cytosol, nucleus, plastid	28.63	43.51
Solyc06g076540.1.1	Tomato	cytosol, nucleus	28.21	42.86
VIT_13s0019g03170.t01	Wine grape	cytosol	29.06	42.77
GSMUA_Achr9P03540_001	Banana	cytosol	28.63	41.88
GSMUA_Achr6P33860_001	Banana	cytosol	29.49	41.82
Solyc09g015020.1.1	Tomato	cytosol, nucleus	27.35	41.56
Solyc09g059210.1.1	Tomato	cytosol, nucleus	11.54	40.3
Solyc09g015000.2.1	Tomato	cytosol	22.22	38.81
GSMUA_Achr7P14910_001	Banana	cytosol	27.35	38.1
GSMUA_Achr8P00290_001	Banana	cytosol	23.5	37.93
Solyc07g045610.1.1	Tomato	cytosol	12.39	37.18
Solyc04g072250.2.1	Tomato	cytosol	21.37	30.67
KRH00090	Soybean	cytosol	22.22	30.41
Solyc04g014480.2.1	Tomato	mitochondrion	18.8	30.34
EES02533	Sorghum	cytosol	21.37	30.3
TraesCS3A01G035400.1	Wheat	cytosol	21.37	30.3
Os01t0135900-02	Rice	plasma membrane	21.37	30.12
TraesCS3B01G048800.1	Wheat	cytosol	20.94	29.7
Zm00001d039941_P001	Maize	cytosol	20.94	29.52
KRH49235	Soybean	cytosol	19.66	29.49
Solyc02g093600.2.1	Tomato	cytosol, plastid	17.09	29.41
HORVU3Hr1G006930.1	Barley	cytosol	20.51	29.09
TraesCS3B01G048700.1	Wheat	cytosol	20.09	28.66
KRH62434	Soybean	cytosol	17.52	26.11
Solyc03g113930.1.1	Tomato	endoplasmic reticulum	19.23	23.94
TraesCS3A01G035500.1	Wheat	mitochondrion, plastid	20.51	23.08
Solyc11g020330.1.1	Tomato	plastid	17.95	22.11
Solyc01g102960.2.1	Tomato	endoplasmic reticulum	17.52	21.69
HORVU3Hr1G006940.2	Barley	cytosol	19.66	18.93

Protein Annotations

EnsemblPlants:Solyc10g086680.1.1	EnsemblPlantsGene:Solyc10g086680.1	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF184	PFAM:PF00011	PFscan:PS01031
SEG:seg	SUPFAM:SSF49764	UniParc:UPI0002769626	UniProt:K4D499	MapMan:35.1	:

Description

No Description!

Coordinates

chr10:-:65452864..65453568

Molecular Weight (calculated)

27099.2 Da

IEP (calculated)

9.995

GRAVY (calculated)

-0.824

Length

234 amino acids

Sequence
(BLAST)

001: MSLVPLFNGR KNHSRCVQNS PPTTTITPQS QKNHNRSDSY DPTTTIMHQY KPNRGNEKDL YNYPPPTRNQ DLHNLFNQLA TTKFTHQFQT SRGQKDPYDP
101: SHKFYLETPR SLIAPSLSFP HVTPFLAQFE CNVTPEAYVF RANNLHGYKK EEVKVQVEDD RILKISGEKK IVEKEYDNWH HFQKKVGKFS TVFNLPEDAG
201: VDKVISTMEK EVLIVTIPKK GAVKKSHVRT VRIF

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.