Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 6
- plasma membrane 5
- endoplasmic reticulum 8
- vacuole 5
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400062882 | Potato | endoplasmic reticulum, golgi | 93.62 | 92.15 |
| Solyc01g102960.2.1 | Tomato | endoplasmic reticulum | 73.4 | 73.02 |
| KRH18614 | Soybean | endoplasmic reticulum | 64.89 | 61.62 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 59.57 | 58.64 |
| KRG93360 | Soybean | endoplasmic reticulum | 61.17 | 58.38 |
| Zm00001d007271_P001 | Maize | cytosol, endoplasmic reticulum | 47.87 | 48.13 |
| VIT_12s0035g01910.t01 | Wine grape | cytosol | 62.77 | 47.2 |
| Solyc06g076520.1.1 | Tomato | cytosol, nucleus, plastid | 38.3 | 46.75 |
| Solyc06g076560.1.1 | Tomato | cytosol, nucleus | 38.3 | 46.75 |
| Solyc09g015020.1.1 | Tomato | cytosol, nucleus | 38.3 | 46.75 |
| Solyc09g059210.1.1 | Tomato | cytosol, nucleus | 16.49 | 46.27 |
| Solyc06g076570.1.1 | Tomato | cytosol, extracellular, nucleus | 37.77 | 46.1 |
| TraesCS4D01G086200.1 | Wheat | endoplasmic reticulum | 48.94 | 45.32 |
| TraesCS4B01G089800.1 | Wheat | endoplasmic reticulum | 48.4 | 44.83 |
| Solyc06g076540.1.1 | Tomato | cytosol, nucleus | 36.7 | 44.81 |
| EES08263 | Sorghum | endoplasmic reticulum | 48.4 | 43.96 |
| Solyc09g015000.2.1 | Tomato | cytosol | 30.85 | 43.28 |
| Solyc07g045610.1.1 | Tomato | cytosol | 17.55 | 42.31 |
| Solyc11g020330.1.1 | Tomato | plastid | 42.55 | 42.11 |
| Solyc02g093600.2.1 | Tomato | cytosol, plastid | 30.32 | 41.91 |
| Os11t0244200-01 | Rice | endoplasmic reticulum | 42.55 | 38.84 |
| HORVU4Hr1G015170.1 | Barley | cytosol, endoplasmic reticulum | 49.47 | 38.75 |
| TraesCS4A01G226700.1 | Wheat | plastid | 46.81 | 35.48 |
| Solyc04g072250.2.1 | Tomato | cytosol | 30.32 | 34.97 |
| Solyc04g014480.2.1 | Tomato | mitochondrion | 26.6 | 34.48 |
| Solyc09g011710.2.1 | Tomato | cytosol | 26.6 | 24.04 |
| Solyc10g086680.1.1 | Tomato | mitochondrion | 23.94 | 19.23 |
Protein Annotations
| EnsemblPlants:Solyc03g113930.1.1 | EnsemblPlantsGene:Solyc03g113930.1 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF170 | PFAM:PF00011 | PFscan:PS01031 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF49764 | TMHMM:TMhelix | UniParc:UPI0002767FDD | UniProt:K4BKP5 |
| MapMan:19.1.8.12 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:63978540..63979106
Molecular Weight (calculated)
21482.2 Da
IEP (calculated)
7.678
GRAVY (calculated)
-0.366
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTRVSFMS FLVLAMVVVL FPSQIKALMP YTRPFWDIAF PPEDPFRILE QTPLTIPKGV ESIALTRSDW KETATEHVIT LDIPGMKKED VKIEVEENRV
101: LRVSGERKTE EEIEGEKWHR AERTCGKFWR QFRLPGNADL EHIKAHLENG VLKITVPKLA EEKKKQSKVI SIAEAVGGED IKANKAEM
101: LRVSGERKTE EEIEGEKWHR AERTCGKFWR QFRLPGNADL EHIKAHLENG VLKITVPKLA EEKKKQSKVI SIAEAVGGED IKANKAEM
001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
Arabidopsis Description
HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.