Factsheet for TraesCS4B01G089800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 6
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G086200.1	Wheat	endoplasmic reticulum	97.04	97.04
HORVU4Hr1G015170.1	Barley	cytosol, endoplasmic reticulum	90.64	76.67
TraesCS4A01G226700.1	Wheat	plastid	91.63	75.0
Zm00001d007271_P001	Maize	cytosol, endoplasmic reticulum	68.47	74.33
EES08263	Sorghum	endoplasmic reticulum	69.46	68.12
Os11t0244200-01	Rice	endoplasmic reticulum	60.59	59.71
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	54.19	57.59
KRH18614	Soybean	endoplasmic reticulum	48.28	49.49
Solyc03g113930.1.1	Tomato	endoplasmic reticulum	44.83	48.4
KRG93360	Soybean	endoplasmic reticulum	46.31	47.72
PGSC0003DMT400062882	Potato	endoplasmic reticulum, golgi	43.35	46.07
Solyc01g102960.2.1	Tomato	endoplasmic reticulum	41.87	44.97
TraesCS3B01G048600.1	Wheat	cytosol	33.99	44.81
TraesCS3B01G049800.1	Wheat	cytosol	32.51	43.71
TraesCS3B01G049900.1	Wheat	cytosol	32.51	43.71
PGSC0003DMT400053402	Potato	endoplasmic reticulum, extracellular	40.89	43.46
TraesCS5B01G245700.1	Wheat	cytosol	32.51	42.86
TraesCS4B01G212200.1	Wheat	cytosol	32.02	41.4
TraesCS4B01G212300.1	Wheat	cytosol	31.53	41.29
TraesCS4B01G211600.1	Wheat	cytosol	30.54	39.49
VIT_12s0035g01910.t01	Wine grape	cytosol	46.31	37.6
TraesCS7B01G088600.1	Wheat	cytosol	28.08	36.08
TraesCS7B01G088700.1	Wheat	cytosol	28.08	36.08
TraesCS7B01G109100.1	Wheat	mitochondrion, peroxisome	23.65	34.78
TraesCS4B01G211700.1	Wheat	cytosol	20.69	33.87
TraesCS6B01G110200.1	Wheat	mitochondrion	31.03	33.87
TraesCS3B01G048800.1	Wheat	cytosol	23.65	29.09
TraesCS3B01G048700.1	Wheat	cytosol	23.15	28.66

Protein Annotations

EnsemblPlants:TraesCS4B01G089800.1	EnsemblPlantsGene:TraesCS4B01G089800	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF170	PFAM:PF00011	PFscan:PS01031
SEG:seg	SignalP:SignalP-TM	SUPFAM:SSF49764	TIGR:cd06472	TMHMM:TMhelix	MapMan:19.1.8.12

Description

No Description!

Coordinates

chr4B:-:91184265..91184876

Molecular Weight (calculated)

21957.2 Da

IEP (calculated)

6.298

GRAVY (calculated)

-0.300

Length

203 amino acids

Sequence
(BLAST)

001: MEAVSKKALV TTAILALAVL APPVAGLVPY GVSSGLWDLL DDPFRVLEQT PLAVQRPASA GGPGASISSA VALARCDWKE TPDAHVISLD VPGVRRDDVK
101: VEVEENRVLR VSGERKADEE KEGERWHRAD RAAGRFWRRF RMPAGADVDR VTARLEDGVL IVTVPKIAEH QRREPRVINI AGEDANSGGK GADAEVRPSK
201: AEM

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.