Factsheet for PGSC0003DMT400062882

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 6
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g113930.1.1	Tomato	endoplasmic reticulum	92.15	93.62
PGSC0003DMT400053402	Potato	endoplasmic reticulum, extracellular	74.87	74.87
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	59.16	59.16
KRH18614	Soybean	endoplasmic reticulum	61.26	59.09
KRG93360	Soybean	endoplasmic reticulum	57.07	55.33
Zm00001d007271_P001	Maize	cytosol, endoplasmic reticulum	46.07	47.06
VIT_12s0035g01910.t01	Wine grape	cytosol	60.73	46.4
PGSC0003DMT400007587	Potato	cytosol	37.17	45.81
PGSC0003DMT400078008	Potato	cytosol	36.13	44.81
PGSC0003DMT400078201	Potato	cytosol	36.13	44.81
PGSC0003DMT400030381	Potato	mitochondrion	28.8	44.72
PGSC0003DMT400030387	Potato	cytosol	35.6	44.16
PGSC0003DMT400078006	Potato	cytosol	35.6	44.16
PGSC0003DMT400030386	Potato	cytosol	36.13	43.95
TraesCS4D01G086200.1	Wheat	endoplasmic reticulum	46.6	43.84
PGSC0003DMT400089913	Potato	cytosol	35.08	43.79
PGSC0003DMT400038705	Potato	cytosol	30.37	43.61
PGSC0003DMT400078202	Potato	cytosol	35.08	43.51
PGSC0003DMT400078007	Potato	cytosol	35.08	43.51
EES08263	Sorghum	endoplasmic reticulum	47.12	43.48
TraesCS4B01G089800.1	Wheat	endoplasmic reticulum	46.07	43.35
PGSC0003DMT400030385	Potato	cytosol	37.17	43.29
PGSC0003DMT400030382	Potato	cytosol	34.55	42.86
PGSC0003DMT400023932	Potato	endoplasmic reticulum	42.93	41.62
PGSC0003DMT400044066	Potato	cytosol	29.84	40.71
PGSC0003DMT400032851	Potato	cytosol	29.84	40.43
HORVU4Hr1G015170.1	Barley	cytosol, endoplasmic reticulum	47.64	37.92
Os11t0244200-01	Rice	endoplasmic reticulum	40.31	37.38
TraesCS4A01G226700.1	Wheat	plastid	45.03	34.68
PGSC0003DMT400060736	Potato	mitochondrion	25.65	33.79
PGSC0003DMT400079950	Potato	cytosol	29.84	33.73
PGSC0003DMT400088908	Potato	cytosol	17.8	32.69
PGSC0003DMT400030603	Potato	cytosol	25.65	25.39
PGSC0003DMT400049226	Potato	cytosol	25.13	24.62
PGSC0003DMT400049225	Potato	mitochondrion	23.56	19.23

Protein Annotations

EnsemblPlants:PGSC0003DMT400062882	EnsemblPlantsGene:PGSC0003DMG400024476	EntrezGene:102584371	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20
InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF170	PFAM:PF00011
PFscan:PS01031	PGSC:PGSC0003DMG400024476	RefSeq:XP_006345019.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49764
TMHMM:TMhelix	UniParc:UPI000296BC18	UniProt:M1C9Q4	MapMan:19.1.8.12	:	:

Description

Heat-shock protein [Source:PGSC_GENE;Acc:PGSC0003DMG400024476]

Coordinates

chr3:+:53778612..53779610

Molecular Weight (calculated)

21930.6 Da

IEP (calculated)

7.613

GRAVY (calculated)

-0.420

Length

191 amino acids

Sequence
(BLAST)

001: MVKTRVSFMR FLVLAMAVVF LPSQIQALMP YTRPFWDIAF PTEDPFRILE QTPLTIPKGV ESIALTRSDW KETATEHVIT LDIPGMKKED IKIEVEENRV
101: LRVSGERKTE EEIEGEKWHR AERTCGKFWR QFRLPGNADL EHIKVNLENG VLKITVPKLA EEKKKQSKVI SIAEERKAVG GEDITANKAE T

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.