Subcellular Localization
min:
: max
Winner_takes_all: cytosol, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G086200.1 | Wheat | endoplasmic reticulum | 77.5 | 91.63 |
| TraesCS4B01G089800.1 | Wheat | endoplasmic reticulum | 76.67 | 90.64 |
| TraesCS4A01G226700.1 | Wheat | plastid | 81.67 | 79.03 |
| Zm00001d007271_P001 | Maize | cytosol, endoplasmic reticulum | 57.92 | 74.33 |
| EES08263 | Sorghum | endoplasmic reticulum | 59.58 | 69.08 |
| Os11t0244200-01 | Rice | endoplasmic reticulum | 51.25 | 59.71 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 44.58 | 56.02 |
| KRH18614 | Soybean | endoplasmic reticulum | 41.25 | 50.0 |
| Solyc03g113930.1.1 | Tomato | endoplasmic reticulum | 38.75 | 49.47 |
| KRG93360 | Soybean | endoplasmic reticulum | 40.0 | 48.73 |
| PGSC0003DMT400062882 | Potato | endoplasmic reticulum, golgi | 37.92 | 47.64 |
| PGSC0003DMT400053402 | Potato | endoplasmic reticulum, extracellular | 36.25 | 45.55 |
| Solyc01g102960.2.1 | Tomato | endoplasmic reticulum | 35.83 | 45.5 |
| HORVU4Hr1G060760.1 | Barley | cytosol | 26.67 | 42.67 |
| HORVU4Hr1G060720.2 | Barley | cytosol | 27.92 | 42.41 |
| VIT_12s0035g01910.t01 | Wine grape | cytosol | 40.0 | 38.4 |
| HORVU3Hr1G007380.1 | Barley | mitochondrion | 29.17 | 35.9 |
| HORVU6Hr1G015130.1 | Barley | cytosol | 26.25 | 35.59 |
| HORVU2Hr1G077710.2 | Barley | endoplasmic reticulum, golgi | 33.33 | 34.93 |
| HORVU3Hr1G006530.1 | Barley | cytosol | 30.0 | 34.29 |
| HORVU3Hr1G007500.4 | Barley | cytosol, plastid | 30.42 | 33.8 |
| HORVU0Hr1G020420.1 | Barley | plastid | 21.25 | 29.82 |
| HORVU3Hr1G006930.1 | Barley | cytosol | 20.42 | 29.7 |
| HORVU2Hr1G120170.1 | Barley | cytosol | 29.58 | 28.63 |
| HORVU3Hr1G006940.2 | Barley | cytosol | 17.92 | 17.7 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G015170.1 | EnsemblPlantsGene:HORVU4Hr1G015170 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF170 | PFAM:PF00011 | PFscan:PS01031 |
| SEG:seg | SUPFAM:SSF49764 | TMHMM:TMhelix | UniParc:UPI000B470E7B | UniProt:A0A287NC14 | MapMan:19.1.8.12 |
Description
No Description!
Coordinates
chrchr4H:+:57578754..57579856
Molecular Weight (calculated)
25918.7 Da
IEP (calculated)
8.521
GRAVY (calculated)
-0.412
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: KESSTHSDSA HIHTFEKETA RSHQTKLKLP TKQVAMAAVS KKALVATAVL ALAVLAPPVA GLVPYGVSSG LWDLLDDPFR VLEQAPLAVQ RPASAGDPAA
101: SVSSPMALAR CDWKETPDAH VISLDVPGVR RDDVKVEVEE NRVLRVSGER KADEEKEGER WHRAERAAGR FWRRFRMPAG ADVERVTARL EDGVLTVTVP
201: KIAEHQRREP RVINIAGEAS NNGGKGAGAG AEVTSSKSEM
101: SVSSPMALAR CDWKETPDAH VISLDVPGVR RDDVKVEVEE NRVLRVSGER KADEEKEGER WHRAERAAGR FWRRFRMPAG ADVERVTARL EDGVLTVTVP
201: KIAEHQRREP RVINIAGEAS NNGGKGAGAG AEVTSSKSEM
001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL
Arabidopsis Description
HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.