Factsheet for GSMUA_Achr10P11030_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 6
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18614	Soybean	endoplasmic reticulum	62.3	60.1
Solyc03g113930.1.1	Tomato	endoplasmic reticulum	58.64	59.57
PGSC0003DMT400062882	Potato	endoplasmic reticulum, golgi	59.16	59.16
KRG93360	Soybean	endoplasmic reticulum	57.07	55.33
PGSC0003DMT400053402	Potato	endoplasmic reticulum, extracellular	54.97	54.97
TraesCS4D01G086200.1	Wheat	endoplasmic reticulum	58.12	54.68
Zm00001d007271_P001	Maize	cytosol, endoplasmic reticulum	53.4	54.55
TraesCS4B01G089800.1	Wheat	endoplasmic reticulum	57.59	54.19
Solyc01g102960.2.1	Tomato	endoplasmic reticulum	53.4	53.97
GSMUA_Achr5P17640_001	Banana	cytosol	23.04	49.44
EES08263	Sorghum	endoplasmic reticulum	52.88	48.79
GSMUA_Achr1P21160_001	Banana	cytosol	38.22	46.79
GSMUA_Achr9P00510_001	Banana	cytosol	37.7	45.86
Os11t0244200-01	Rice	endoplasmic reticulum	49.21	45.63
HORVU4Hr1G015170.1	Barley	cytosol, endoplasmic reticulum	56.02	44.58
GSMUA_Achr8P29100_001	Banana	endoplasmic reticulum	46.6	44.5
GSMUA_Achr9P03540_001	Banana	cytosol	36.65	43.75
VIT_12s0035g01910.t01	Wine grape	cytosol	57.07	43.6
TraesCS4A01G226700.1	Wheat	plastid	56.02	43.15
GSMUA_Achr6P33860_001	Banana	cytosol	36.65	42.42
GSMUA_Achr7P14910_001	Banana	cytosol	32.98	37.5
GSMUA_Achr1P21150_001	Banana	cytosol	30.89	36.42
GSMUA_Achr9P27260_001	Banana	peroxisome	26.7	35.17
GSMUA_Achr8P00290_001	Banana	cytosol	25.65	33.79

Protein Annotations

MapMan:19.1.8.12	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009628	EnsemblPlantsGene:GSMUA_Achr10G11030_001	EnsemblPlants:GSMUA_Achr10P11030_001	EnsemblPlants:GSMUA_Achr10T11030_001	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	UniProt:M0RH79	PFAM:PF00011	PFscan:PS01031	PFscan:PS51257
PANTHER:PTHR11527	PANTHER:PTHR11527:SF170	SUPFAM:SSF49764	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002962A03
SEG:seg	:	:	:	:	:

Description

Putative 22.7 kDa class IV heat shock protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G11030_001]

Coordinates

chr10:-:20657879..20658781

Molecular Weight (calculated)

21559.1 Da

IEP (calculated)

6.966

GRAVY (calculated)

-0.284

Length

191 amino acids

Sequence
(BLAST)

001: MRRSPFLVLF VVLFLASCAA PAANGLMPYY GRLWDMMMPA AYDDPFRILE QTPFTVPKAV DALALARADW KETPHAHVIS LDVPGVRRED IKVEVEENRV
101: LRITGERKGE EEEVEGEKWH RAERMAGKFW RQFRLPASAD VDAVKAHLED GVLRVTVPKL VEGTRRQPRL INIAQEADKG GEDIKASKAV V

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.