CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007271_P001	Maize	cytosol, endoplasmic reticulum	79.23	87.7
TraesCS4D01G086200.1	Wheat	endoplasmic reticulum	69.57	70.94
TraesCS4B01G089800.1	Wheat	endoplasmic reticulum	68.12	69.46
Os11t0244200-01	Rice	endoplasmic reticulum	65.22	65.53
HORVU4Hr1G015170.1	Barley	cytosol, endoplasmic reticulum	69.08	59.58
TraesCS4A01G226700.1	Wheat	plastid	65.7	54.84
GSMUA_Achr10P...	Banana	endoplasmic reticulum, golgi	48.79	52.88
KRH18614	Soybean	endoplasmic reticulum	46.38	48.48
Solyc03g113930.1.1	Tomato	endoplasmic reticulum	43.96	48.4
PGSC0003DMT400062882	Potato	endoplasmic reticulum, golgi	43.48	47.12
EES00359	Sorghum	cytosol	32.85	45.33
KRG93360	Soybean	endoplasmic reticulum	43.0	45.18
EES02532	Sorghum	cytosol	32.37	44.08
PGSC0003DMT400053402	Potato	endoplasmic reticulum, extracellular	40.58	43.98
Solyc01g102960.2.1	Tomato	endoplasmic reticulum	40.1	43.92
EES00358	Sorghum	cytosol	31.88	43.71
EER95124	Sorghum	cytosol	32.85	43.04
EES02531	Sorghum	cytosol	31.4	42.76
KXG39718	Sorghum	cytosol	32.37	42.68
EES02535	Sorghum	cytosol	30.92	42.67
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	43.96	42.13
EER95120	Sorghum	cytosol	31.88	41.77
VIT_12s0035g01910.t01	Wine grape	cytosol	44.93	37.2
EER89539	Sorghum	mitochondrion	25.12	35.14
EES04437	Sorghum	mitochondrion	29.47	33.33
EES02533	Sorghum	cytosol	23.67	29.7

Protein Annotations

MapMan:19.1.8.12	Gene3D:2.60.40.790	EntrezGene:8076920	InterPro:A-crystallin/Hsp20_dom	UniProt:C5Y7T5	EnsemblPlants:EES08263
ProteinID:EES08263	ProteinID:EES08263.1	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PFAM:PF00011	PFscan:PS01031
PANTHER:PTHR11527	PANTHER:PTHR11527:SF170	EnsemblPlantsGene:SORBI_3005G086400	SUPFAM:SSF49764	unigene:Sbi.11840	TMHMM:TMhelix
UniParc:UPI0001A86647	RefSeq:XP_002449275.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:11963280..11964212

Molecular Weight (calculated)

22150.5 Da

IEP (calculated)

6.295

GRAVY (calculated)

-0.164

Length

207 amino acids

Sequence
(BLAST)

001: MADALVSSKK ASASAAVVLA VAVATMACLS APVAALVPYG RAGGGLFDLM LLDDPFRVLE QSPPVPLPRA SLDSASVALA RCDWKETPDA HVITVDVPGV
101: RREDVKVEVE ENSRVLRVSG ERRADEEKEG ERWHRAERAA GRFWRRFRMP AGADVDRVSA RLEDGVLTVT MPKVAGHRGR EPRVISIDGG DVGGAEAAEV
201: KASKAEM

Best Arabidopsis Sequence Match ( AT4G10250.1 )
(BLAST)

001: MMKHLLSIFF IGALLLGNIK TSEGSLSSAL ETTPGSLLSD LWLDRFPDPF KILERIPLGL ERDTSVALSP ARVDWKETAE GHEIMLDIPG LKKDEVKIEV
101: EENGVLRVSG ERKREEEKKG DQWHRVERSY GKFWRQFKLP DNVDMESVKA KLENGVLTIN LTKLSPEKVK GPRVVNIAAE EDQTAKISSS ESKEL

Arabidopsis Description

HSP22.022.0 kDa heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q38806]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.