CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0136000-00	Rice	cytosol	88.82	90.6
Os01t0136100-01	Rice	cytosol, nucleus, plastid	87.5	88.67
EES00359	Sorghum	cytosol	87.5	88.67
Os01t0136200-01	Rice	cytosol, plastid	86.84	88.0
EES00358	Sorghum	cytosol	85.53	86.09
EES02531	Sorghum	cytosol	85.53	85.53
TraesCS3D01G045500.1	Wheat	cytosol	82.89	83.44
TraesCSU01G175200.1	Wheat	cytosol, golgi	82.24	82.78
TraesCS3B01G049800.1	Wheat	cytosol	82.24	82.78
TraesCS3B01G049900.1	Wheat	cytosol	82.24	82.78
TraesCS3D01G045700.1	Wheat	cytosol	82.24	82.78
TraesCS3D01G046700.1	Wheat	cytosol	82.24	82.78
TraesCS3D01G046800.1	Wheat	cytosol	82.24	82.78
TraesCS3A01G034500.1	Wheat	cytosol	81.58	82.12
TraesCS3D01G046300.1	Wheat	cytosol	81.58	82.12
TraesCS3D01G046600.1	Wheat	cytosol	81.58	82.12
TraesCSU01G164000.1	Wheat	cytosol	81.58	82.12
TraesCS3D01G045800.1	Wheat	cytosol	81.58	81.58
TraesCS3D01G045600.1	Wheat	cytosol	80.92	81.46
TraesCS3A01G034000.1	Wheat	cytosol	80.92	81.46
TraesCSU01G194600.1	Wheat	cytosol	80.26	80.79
TraesCS3A01G033900.1	Wheat	cytosol	80.26	80.79
TraesCS5B01G245700.1	Wheat	cytosol	81.58	80.52
EER95124	Sorghum	cytosol	75.66	72.78
EER95120	Sorghum	cytosol	74.34	71.52
KXG39718	Sorghum	cytosol	73.03	70.7
HORVU3Hr1G007380.1	Barley	mitochondrion	82.89	64.62
TraesCSU01G047300.1	Wheat	cytosol	81.58	60.19
HORVU3Hr1G006530.1	Barley	cytosol	82.89	60.0
HORVU3Hr1G007500.4	Barley	cytosol, plastid	82.89	58.33
EES02535	Sorghum	cytosol	52.63	53.33
HORVU2Hr1G120170.1	Barley	cytosol	80.92	49.6
EES02533	Sorghum	cytosol	46.71	43.03
EER89539	Sorghum	mitochondrion	35.53	36.49
EES04437	Sorghum	mitochondrion	42.11	34.97
EES08263	Sorghum	endoplasmic reticulum	44.08	32.37
KXG26390	Sorghum	endoplasmic reticulum, extracellular, golgi	44.74	31.48

Protein Annotations

MapMan:19.1.8.1	Gene3D:2.60.40.790	EntrezGene:8073343	InterPro:A-crystallin/Hsp20_dom	UniProt:C5XQS1	EnsemblPlants:EES02532
ProteinID:EES02532	ProteinID:EES02532.1	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978
PFAM:PF00011	PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF241	EnsemblPlantsGene:SORBI_3003G082100	SUPFAM:SSF49764
UniParc:UPI0001A84B62	RefSeq:XP_002457412.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:7045568..7046335

Molecular Weight (calculated)

17117.3 Da

IEP (calculated)

7.701

GRAVY (calculated)

-0.561

Length

152 amino acids

Sequence
(BLAST)

001: MSLVRRSNIF DPFADFWDPF DGVFRSLVVP SVASSGRDTA AFANARIDWK EMPEAHVFKA DLPGVKKEEV KVEVEDGNVL VISGERSKEK EDKNDKWHRV
101: ERSSGKFMRR FRLPENAKTD QVNAGLENGV LTVTVPKAEV KKPEVKTIEI SG

Best Arabidopsis Sequence Match ( AT5G59720.1 )
(BLAST)

001: MSLIPSIFGG RRSNVFDPFS QDLWDPFEGF FTPSSALANA STARDVAAFT NARVDWKETP EAHVFKADLP GLKKEEVKVE VEDKNVLQIS GERSKENEEK
101: NDKWHRVERA SGKFMRRFRL PENAKMEEVK ATMENGVLTV VVPKAPEKKP QVKSIDISGA N

Arabidopsis Description

HSP18.118.1 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:P19037]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.