Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G164000.1 | Wheat | cytosol | 73.3 | 100.0 |
| TraesCS3B01G049900.1 | Wheat | cytosol | 71.36 | 97.35 |
| TraesCS3D01G045700.1 | Wheat | cytosol | 70.87 | 96.69 |
| TraesCSU01G194600.1 | Wheat | cytosol | 69.9 | 95.36 |
| TraesCSU01G175200.1 | Wheat | cytosol, golgi | 69.42 | 94.7 |
| EES00358 | Sorghum | cytosol | 62.62 | 85.43 |
| EES02531 | Sorghum | cytosol | 62.14 | 84.21 |
| Zm00001d008577_P001 | Maize | cytosol | 63.11 | 83.87 |
| EES00359 | Sorghum | cytosol | 60.68 | 83.33 |
| Os01t0136100-01 | Rice | cytosol, nucleus, plastid | 60.19 | 82.67 |
| Os01t0136000-00 | Rice | cytosol | 59.71 | 82.55 |
| Os01t0136200-01 | Rice | cytosol, plastid | 59.71 | 82.0 |
| EES02532 | Sorghum | cytosol | 60.19 | 81.58 |
| HORVU3Hr1G007380.1 | Barley | mitochondrion | 75.24 | 79.49 |
| TraesCSU01G019000.1 | Wheat | mitochondrion | 32.04 | 35.48 |
Protein Annotations
| EnsemblPlants:TraesCSU01G047300.1 | EnsemblPlantsGene:TraesCSU01G047300 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF241 | PFAM:PF00011 | PFscan:PS01031 |
| SEG:seg | SUPFAM:SSF49764 | TIGR:cd06472 | MapMan:19.1.8.1 | : | : |
Description
No Description!
Coordinates
chrUn:-:37338311..37338931
Molecular Weight (calculated)
23282.8 Da
IEP (calculated)
9.716
GRAVY (calculated)
-0.560
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQEQHLRRY KYLSLSPIGL HPNSNQCQAK VDDILFLPTI HRIFRAHKPK QSAPTMSIVR RSNVFNPFAD LWADPFDTFR SIVPAISGGN SETAAFANAR
101: VDWKESPEAH VFKADLPGVK KEEVKVELED GNVLVVSGER TKEKEDKNDK WHRVERSSGK FVRRFRLPED AKVEEVKAGL ENGVLTVTVP KAEVKKPEVK
201: AIEISG
101: VDWKESPEAH VFKADLPGVK KEEVKVELED GNVLVVSGER TKEKEDKNDK WHRVERSSGK FVRRFRLPED AKVEEVKAGL ENGVLTVTVP KAEVKKPEVK
201: AIEISG
001: MSLIPSIFGG RRSNVFDPFS QDLWDPFEGF FTPSSALANA STARDVAAFT NARVDWKETP EAHVFKADLP GLKKEEVKVE VEDKNVLQIS GERSKENEEK
101: NDKWHRVERA SGKFMRRFRL PENAKMEEVK ATMENGVLTV VVPKAPEKKP QVKSIDISGA N
101: NDKWHRVERA SGKFMRRFRL PENAKMEEVK ATMENGVLTV VVPKAPEKKP QVKSIDISGA N
Arabidopsis Description
HSP18.118.1 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:P19037]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.