Factsheet for TraesCSU01G175200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 23128297

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G164000.1	Wheat	cytosol	94.7	94.7
TraesCSU01G194600.1	Wheat	cytosol	94.04	94.04
EES00358	Sorghum	cytosol	87.42	87.42
EES02531	Sorghum	cytosol	86.75	86.18
Zm00001d008577_P001	Maize	cytosol	88.08	85.81
Os01t0136100-01	Rice	cytosol, nucleus, plastid	84.11	84.67
EES00359	Sorghum	cytosol	83.44	84.0
Os01t0136200-01	Rice	cytosol, plastid	83.44	84.0
Os01t0136000-00	Rice	cytosol	82.78	83.89
EES02532	Sorghum	cytosol	82.78	82.24
TraesCSU01G047300.1	Wheat	cytosol	94.7	69.42
TraesCSU01G019000.1	Wheat	mitochondrion	45.03	36.56

Protein Annotations

EnsemblPlants:TraesCSU01G175200.1	EnsemblPlantsGene:TraesCSU01G175200	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF241	PFAM:PF00011	PFscan:PS01031
SEG:seg	SUPFAM:SSF49764	TIGR:cd06472	MapMan:19.1.8.1	:	:

Description

No Description!

Coordinates

chrUn:+:263451484..263451939

Molecular Weight (calculated)

16906.0 Da

IEP (calculated)

5.888

GRAVY (calculated)

-0.532

Length

151 amino acids

Sequence
(BLAST)

001: MSIVRRSNVF DPFADLWADP FDTFRSIVPA ISGGSNETAA FANARVDWKE TPEAHVFKVD LPGVKKEEVK VEVEDGNVLV VSGERSREKE DKNDKWHRVE
101: RSSGKFVRRF RLPEDAKVEE VKAGLENGVL TVTVPKAEVK KPEVKAIEIS G

Best Arabidopsis Sequence Match ( AT1G07400.1 )
(BLAST)

001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG

Arabidopsis Description

HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.