Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G049900.1 | Wheat | cytosol | 94.16 | 96.03 |
| TraesCS3B01G049800.1 | Wheat | cytosol | 94.16 | 96.03 |
| TraesCS3A01G034500.1 | Wheat | cytosol | 94.16 | 96.03 |
| TraesCS3D01G046600.1 | Wheat | cytosol | 93.51 | 95.36 |
| TraesCS3D01G046300.1 | Wheat | cytosol | 93.51 | 95.36 |
| EES00358 | Sorghum | cytosol | 83.12 | 84.77 |
| EES00359 | Sorghum | cytosol | 82.47 | 84.67 |
| Zm00001d008577_P001 | Maize | cytosol | 85.06 | 84.52 |
| Os01t0136100-01 | Rice | cytosol, nucleus, plastid | 81.82 | 84.0 |
| EES02531 | Sorghum | cytosol | 82.47 | 83.55 |
| Os01t0136200-01 | Rice | cytosol, plastid | 81.17 | 83.33 |
| Os01t0136000-00 | Rice | cytosol | 80.52 | 83.22 |
| EES02532 | Sorghum | cytosol | 80.52 | 81.58 |
| TraesCS4B01G212300.1 | Wheat | cytosol | 71.43 | 70.97 |
| TraesCS4B01G212200.1 | Wheat | cytosol | 71.43 | 70.06 |
| TraesCS4B01G211600.1 | Wheat | cytosol | 68.83 | 67.52 |
| HORVU3Hr1G007500.4 | Barley | cytosol, plastid | 93.51 | 66.67 |
| TraesCS4B01G211700.1 | Wheat | cytosol | 43.51 | 54.03 |
| TraesCS3B01G048600.1 | Wheat | cytosol | 50.65 | 50.65 |
| TraesCS7B01G088600.1 | Wheat | cytosol | 48.05 | 46.84 |
| TraesCS7B01G088700.1 | Wheat | cytosol | 48.05 | 46.84 |
| TraesCS3B01G048700.1 | Wheat | cytosol | 43.51 | 40.85 |
| TraesCS3B01G048800.1 | Wheat | cytosol | 42.21 | 39.39 |
| TraesCS7B01G109100.1 | Wheat | mitochondrion, peroxisome | 34.42 | 38.41 |
| TraesCS6B01G110200.1 | Wheat | mitochondrion | 44.16 | 36.56 |
| TraesCS4B01G089800.1 | Wheat | endoplasmic reticulum | 42.86 | 32.51 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G245700.1 | EnsemblPlantsGene:TraesCS5B01G245700 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 | InterPro:HSP20-like_chaperone |
| InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF241 | PFAM:PF00011 | PFscan:PS01031 |
| SEG:seg | SUPFAM:SSF49764 | TIGR:cd06472 | MapMan:19.1.8.1 | : | : |
Description
No Description!
Coordinates
chr5B:-:426651504..426651968
Molecular Weight (calculated)
17341.4 Da
IEP (calculated)
4.986
GRAVY (calculated)
-0.618
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMVRRSNVF DPFADLWADP FDTFRSIVPA MISGNNNNDE TAAFANARVD WKETPEAHVF KADLPGVKKE EVKVEVEDGN VLVVSGERTK EEEDKNDKWH
101: RVERSSGKFV RRFRLPEDAK VEEVKAGLEN GVLTVTVPKA EVKKPEVKAI EITG
101: RVERSSGKFV RRFRLPEDAK VEEVKAGLEN GVLTVTVPKA EVKKPEVKAI EITG
001: MSLIPSFFGN NRRSNSIFDP FSLDVWDPFK ELQFPSSLSG ETSAITNARV DWKETAEAHV FKADLPGMKK EEVKVEIEDD SVLKISGERH VEKEEKQDTW
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
101: HRVERSSGQF SRKFKLPENV KMDQVKASME NGVLTVTVPK VEEAKKKAQV KSIDISG
Arabidopsis Description
HSP17.817.8 kDa class I heat shock protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.