Factsheet for TraesCS4B01G211700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G212300.1	Wheat	cytosol	66.94	53.55
TraesCS4B01G212200.1	Wheat	cytosol	67.74	53.5
PGSC0003DMT400088908	Potato	cytosol	41.13	49.04
TraesCS4B01G211600.1	Wheat	cytosol	61.29	48.41
PGSC0003DMT400030386	Potato	cytosol	56.45	44.59
TraesCS3B01G049900.1	Wheat	cytosol	54.03	44.37
TraesCS3B01G049800.1	Wheat	cytosol	54.03	44.37
GSMUA_Achr9P00510_001	Banana	cytosol	55.65	43.95
VIT_13s0019g03090.t01	Wine grape	cytosol	56.45	43.75
TraesCS5B01G245700.1	Wheat	cytosol	54.03	43.51
PGSC0003DMT400007587	Potato	cytosol	54.03	43.23
GSMUA_Achr1P21160_001	Banana	cytosol	54.03	42.95
VIT_13s0019g03160.t01	Wine grape	cytosol	54.84	42.5
Solyc09g015020.1.1	Tomato	cytosol, nucleus	52.42	42.21
PGSC0003DMT400030387	Potato	cytosol	52.42	42.21
PGSC0003DMT400089913	Potato	cytosol	50.81	41.18
GSMUA_Achr5P17640_001	Banana	cytosol	29.03	40.45
PGSC0003DMT400030382	Potato	cytosol	50.0	40.26
PGSC0003DMT400030385	Potato	cytosol	53.23	40.24
VIT_13s0019g02920.t01	Wine grape	cytosol	42.74	38.97
Solyc09g015000.2.1	Tomato	cytosol	41.13	38.06
VIT_13s0019g03010.t01	Wine grape	cytosol, mitochondrion	41.94	36.11
VIT_13s0019g03030.t01	Wine grape	cytosol	29.84	34.26
VIT_13s0019g02900.t01	Wine grape	cytosol	29.84	34.26
TraesCS7B01G088700.1	Wheat	cytosol	37.9	29.75
TraesCS3B01G048700.1	Wheat	cytosol	38.71	29.27
TraesCS7B01G088600.1	Wheat	cytosol	37.1	29.11
TraesCS3B01G048800.1	Wheat	cytosol	37.9	28.48
PGSC0003DMT400030381	Potato	mitochondrion	28.23	28.46
VIT_13s0019g03050.t01	Wine grape	cytosol	36.29	27.27
TraesCS3B01G048600.1	Wheat	cytosol	33.06	26.62
TraesCS7B01G109100.1	Wheat	mitochondrion, peroxisome	27.42	24.64
TraesCS6B01G110200.1	Wheat	mitochondrion	35.48	23.66
TraesCS4B01G089800.1	Wheat	endoplasmic reticulum	33.87	20.69

Protein Annotations

EnsemblPlants:TraesCS4B01G211700.1	EnsemblPlantsGene:TraesCS4B01G211700	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF240	PFAM:PF00011	PFscan:PS01031
SEG:seg	SUPFAM:SSF49764	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4B:+:450105729..450106103

Molecular Weight (calculated)

13407.7 Da

IEP (calculated)

11.126

GRAVY (calculated)

-0.545

Length

124 amino acids

Sequence
(BLAST)

001: MSLIRRTNVL DPFSLDLWDP FDGFPFGSGG SGSLVPRTSS DTAAFASARI DWKETPEAHV FKADVPGLKK EEVKVEVEDG NILQIAASGT RSRRRRRTPG
101: TAWSAAAASS CAGSGSRRTP RRSR

Best Arabidopsis Sequence Match ( AT1G53540.1 )
(BLAST)

001: MSLIPSIFGG RRTNVFDPFS LDVFDPFEGF LTPSGLANAP AMDVAAFTNA KVDWRETPEA HVFKADLPGL RKEEVKVEVE DGNILQISGE RSNENEEKND
101: KWHRVERSSG KFTRRFRLPE NAKMEEIKAS MENGVLSVTV PKVPEKKPEV KSIDISG

Arabidopsis Description

HSP17.6C17.6 kDa class I heat shock protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P13853]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.