Factsheet for HORVU0Hr1G020420.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU5Hr1G109710.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G37670.1	HORVU5Hr1G109710.2	AT1G03130.1	21798944
AT5G37670.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT5G37670.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT5G37670.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT5G37670.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT5G37670.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT5G37670.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT5G37670.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT5G37670.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT5G37670.1	HORVU5Hr1G109710.2	AT4G02770.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G205400.1	Wheat	nucleus	77.78	96.38
TraesCS7A01G202200.1	Wheat	mitochondrion, peroxisome	77.78	96.38
TraesCS7B01G109100.1	Wheat	mitochondrion, peroxisome	77.19	95.65
Os06t0253100-01	Rice	mitochondrion	70.18	82.19
EER89539	Sorghum	mitochondrion	63.16	72.97
Zm00001d044728_P001	Maize	mitochondrion	61.99	72.6
GSMUA_Achr9P27260_001	Banana	peroxisome	46.78	55.17
Solyc04g014480.2.1	Tomato	mitochondrion	43.27	51.03
PGSC0003DMT400060736	Potato	mitochondrion	43.27	51.03
KRH72979	Soybean	cytosol, mitochondrion, peroxisome	41.52	49.31
AT5G37670.1	Thale cress	cytosol	39.18	48.91
Bra028141.1-P	Field mustard	cytosol	39.18	48.2
CDY60723	Canola	cytosol	39.18	48.2
CDY01718	Canola	cytosol	39.18	48.2
KRH17351	Soybean	mitochondrion	40.35	47.92
VIT_13s0019g00860.t01	Wine grape	cytosol	39.18	47.18
HORVU4Hr1G060720.2	Barley	cytosol	33.92	36.71
HORVU4Hr1G060760.1	Barley	cytosol	32.16	36.67
HORVU3Hr1G007380.1	Barley	mitochondrion	33.33	29.23
HORVU6Hr1G015130.1	Barley	cytosol	28.66	27.68
HORVU3Hr1G006530.1	Barley	cytosol	33.33	27.14
HORVU3Hr1G007500.4	Barley	cytosol, plastid	32.16	25.46
HORVU3Hr1G006930.1	Barley	cytosol	22.22	23.03
HORVU2Hr1G120170.1	Barley	cytosol	32.16	22.18
HORVU4Hr1G015170.1	Barley	cytosol, endoplasmic reticulum	29.82	21.25
HORVU2Hr1G077710.2	Barley	endoplasmic reticulum, golgi	26.9	20.09
HORVU3Hr1G006940.2	Barley	cytosol	19.88	13.99

Protein Annotations

MapMan:19.1.8.10	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	UniProt:A0A287E637	GO:GO:0000302	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0005782	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	EnsemblPlantsGene:HORVU0Hr1G020420
EnsemblPlants:HORVU0Hr1G020420.1	InterPro:HSP20	InterPro:HSP20-like_chaperone	InterPro:IPR002068	InterPro:IPR008978	PFAM:PF00011
PFscan:PS01031	PANTHER:PTHR11527	PANTHER:PTHR11527:SF142	SUPFAM:SSF49764	UniParc:UPI000B45F9B5	SEG:seg

Description

No Description!

Coordinates

chrchrUn:-:107206242..107207296

Molecular Weight (calculated)

18834.5 Da

IEP (calculated)

9.655

GRAVY (calculated)

-0.332

Length

171 amino acids

Sequence
(BLAST)

001: PTPRPLYQFP TVRFSSQLQS QTIPSELALP FQSMADLFFG GSPFRRLLYA RPLASATAAM DWVETPTSHV LRINVPGLGK DDVKVQVEDG NVLSVRGAAK
101: EKTKEGNEED AVWHVAERGK PEFAREVALP EHVRVDQIRA SVDNGVLTVV VPKEPAPARP RTRPITVSSK L

Best Arabidopsis Sequence Match ( AT5G37670.1 )
(BLAST)

001: MADRGIFLYP FRRFQEWSRS TALIDWMESN NSHIFKINVP GYNKEDIKVQ IEEGNVLSIR GEGIKEEKKE NLVWHVAERE AFSGGGSEFL RRIELPENVK
101: VDQVKAYVEN GVLTVVVPKD TSSKSSKVRN VNITSKL

Arabidopsis Description

HSP15.715.7 kDa heat shock protein, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.