Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 3
- peroxisome 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G37670.1 | PGSC0003DMT400030843 | AT1G03130.1 | 21798944 |
| AT5G37670.1 | PGSC0003DMT400019458 | AT1G13520.1 | 21798944 |
| AT5G37670.1 | PGSC0003DMT400019462 | AT1G13520.1 | 21798944 |
| AT5G37670.1 | PGSC0003DMT400059315 | AT1G13520.1 | 21798944 |
| AT5G37670.1 | PGSC0003DMT400014123 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | PGSC0003DMT400018569 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | PGSC0003DMT400046278 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | PGSC0003DMT400054299 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | PGSC0003DMT400058435 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | PGSC0003DMT400070437 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | PGSC0003DMT400097662 | AT2G41090.1 | 17360592 |
| AT5G37670.1 | PGSC0003DMT400030843 | AT4G02770.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g014480.2.1 | Tomato | mitochondrion | 97.24 | 97.24 |
| KRH17351 | Soybean | mitochondrion | 73.1 | 73.61 |
| KRH72979 | Soybean | cytosol, mitochondrion, peroxisome | 73.1 | 73.61 |
| CDY01718 | Canola | cytosol | 64.14 | 66.91 |
| AT5G37670.1 | Thale cress | cytosol | 62.76 | 66.42 |
| Bra028141.1-P | Field mustard | cytosol | 63.45 | 66.19 |
| CDY60723 | Canola | cytosol | 63.45 | 66.19 |
| VIT_13s0019g00860.t01 | Wine grape | cytosol | 64.14 | 65.49 |
| TraesCS7D01G205400.1 | Wheat | nucleus | 50.34 | 52.9 |
| GSMUA_Achr9P27260_001 | Banana | peroxisome | 52.41 | 52.41 |
| TraesCS7A01G202200.1 | Wheat | mitochondrion, peroxisome | 49.66 | 52.17 |
| TraesCS7B01G109100.1 | Wheat | mitochondrion, peroxisome | 48.97 | 51.45 |
| Os06t0253100-01 | Rice | mitochondrion | 50.34 | 50.0 |
| EER89539 | Sorghum | mitochondrion | 47.59 | 46.62 |
| Zm00001d044728_P001 | Maize | mitochondrion | 44.83 | 44.52 |
| HORVU0Hr1G020420.1 | Barley | plastid | 51.03 | 43.27 |
| PGSC0003DMT400030381 | Potato | mitochondrion | 33.1 | 39.02 |
| PGSC0003DMT400089913 | Potato | cytosol | 40.69 | 38.56 |
| PGSC0003DMT400030387 | Potato | cytosol | 40.69 | 38.31 |
| PGSC0003DMT400030382 | Potato | cytosol | 40.69 | 38.31 |
| PGSC0003DMT400030386 | Potato | cytosol | 41.38 | 38.22 |
| PGSC0003DMT400007587 | Potato | cytosol | 40.69 | 38.06 |
| PGSC0003DMT400078201 | Potato | cytosol | 39.31 | 37.01 |
| PGSC0003DMT400078202 | Potato | cytosol | 38.62 | 36.36 |
| PGSC0003DMT400078008 | Potato | cytosol | 38.62 | 36.36 |
| PGSC0003DMT400030385 | Potato | cytosol | 40.69 | 35.98 |
| PGSC0003DMT400078006 | Potato | cytosol | 37.93 | 35.71 |
| PGSC0003DMT400038705 | Potato | cytosol | 32.41 | 35.34 |
| PGSC0003DMT400078007 | Potato | cytosol | 37.24 | 35.06 |
| PGSC0003DMT400032851 | Potato | cytosol | 33.1 | 34.04 |
| PGSC0003DMT400044066 | Potato | cytosol | 32.41 | 33.57 |
| PGSC0003DMT400079950 | Potato | cytosol | 36.55 | 31.36 |
| PGSC0003DMT400088908 | Potato | cytosol | 20.0 | 27.88 |
| PGSC0003DMT400053402 | Potato | endoplasmic reticulum, extracellular | 35.17 | 26.7 |
| PGSC0003DMT400062882 | Potato | endoplasmic reticulum, golgi | 33.79 | 25.65 |
| PGSC0003DMT400030603 | Potato | cytosol | 32.41 | 24.35 |
| PGSC0003DMT400023932 | Potato | endoplasmic reticulum | 32.41 | 23.86 |
| PGSC0003DMT400049226 | Potato | cytosol | 31.03 | 23.08 |
| PGSC0003DMT400049225 | Potato | mitochondrion | 31.03 | 19.23 |
Protein Annotations
| EntrezGene:102594103 | MapMan:19.1.8.10 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | GO:GO:0000302 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005782 | GO:GO:0006457 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 | GO:GO:0009987 | InterPro:HSP20 |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | UniProt:M1C6C1 | PFAM:PF00011 | EnsemblPlantsGene:PGSC0003DMG400023622 |
| PGSC:PGSC0003DMG400023622 | EnsemblPlants:PGSC0003DMT400060736 | PFscan:PS01031 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF142 | SUPFAM:SSF49764 |
| UniParc:UPI000294E4B2 | RefSeq:XP_006346757.1 | : | : | : | : |
Description
Peroxisomal small heat shock protein [Source:PGSC_GENE;Acc:PGSC0003DMG400023622]
Coordinates
chr4:+:8358204..8359541
Molecular Weight (calculated)
16056.2 Da
IEP (calculated)
7.845
GRAVY (calculated)
-0.406
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIFGDPFRR FLLSPTIYRS FSGSPALLDW IESPNSHIFK INVPGYSKED IKVQVEDGNV LVVKAEGHGG KKDEFHGKDK DVVWHVAERG GGRGGDFSRE
101: IELPEDVKVD QIKAQVENGV LTIVVPKDAT PKTSKVRNIN ITSKL
101: IELPEDVKVD QIKAQVENGV LTIVVPKDAT PKTSKVRNIN ITSKL
001: MADRGIFLYP FRRFQEWSRS TALIDWMESN NSHIFKINVP GYNKEDIKVQ IEEGNVLSIR GEGIKEEKKE NLVWHVAERE AFSGGGSEFL RRIELPENVK
101: VDQVKAYVEN GVLTVVVPKD TSSKSSKVRN VNITSKL
101: VDQVKAYVEN GVLTVVVPKD TSSKSSKVRN VNITSKL
Arabidopsis Description
HSP15.715.7 kDa heat shock protein, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.