Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| cytosol:
22313117
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400046278 | Potato | cytosol | 51.68 | 100.0 |
| Solyc01g008950.2.1 | Tomato | nucleus | 100.0 | 100.0 |
| Bra002368.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Bra006595.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Bra020155.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| PGSC0003DMT400018569 | Potato | cytosol | 99.33 | 99.33 |
| PGSC0003DMT400070437 | Potato | cytosol | 99.33 | 99.33 |
| Bra012037.1-P | Field mustard | cytosol | 98.66 | 98.66 |
| Bra019453.1-P | Field mustard | cytosol | 98.66 | 98.66 |
| CDY04474 | Canola | cytosol | 98.66 | 98.66 |
| CDY56411 | Canola | cytosol | 98.66 | 98.66 |
| CDY65072 | Canola | cytosol | 98.66 | 98.66 |
| CDX92401 | Canola | cytosol | 88.59 | 98.51 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 76.51 | 98.28 |
| AT3G56800.1 | Thale cress | cytosol | 97.99 | 97.99 |
| AT5G21274.1 | Thale cress | cytosol | 97.99 | 97.99 |
| Bra000214.1-P | Field mustard | cytosol | 97.99 | 97.99 |
| Bra003251.1-P | Field mustard | cytosol | 97.99 | 97.99 |
| Bra014671.1-P | Field mustard | cytosol | 97.99 | 97.99 |
| GSMUA_Achr10P... | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 97.99 | 97.99 |
| Os01t0267900-01 | Rice | cytosol | 97.99 | 97.99 |
| Os01t0279300-01 | Rice | cytosol, plasma membrane, plastid | 97.99 | 97.99 |
| Os03t0319300-01 | Rice | cytosol, extracellular, nucleus | 97.99 | 97.99 |
| Os07t0687200-02 | Rice | cytosol | 97.99 | 97.99 |
| PGSC0003DMT400054299 | Potato | cytosol | 73.83 | 97.35 |
| Bra007269.1-P | Field mustard | cytosol | 97.32 | 97.32 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 97.32 | 97.32 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 97.32 | 97.32 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 97.32 | 97.32 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 97.32 | 97.32 |
| Bra034981.1-P | Field mustard | cytosol | 94.63 | 97.24 |
| CDY12321 | Canola | cytosol | 94.63 | 97.24 |
| Zm00001d008278_P001 | Maize | cytosol | 82.55 | 96.85 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 96.64 | 96.64 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 96.64 | 96.64 |
| Os05t0491100-01 | Rice | cytosol, extracellular | 96.64 | 96.64 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 98.66 | 96.08 |
| CDY55678 | Canola | cytosol | 95.97 | 95.97 |
| Bra025438.1-P | Field mustard | cytosol | 72.48 | 95.58 |
| TraesCS1A01G308800.1 | Wheat | cytosol | 83.89 | 95.42 |
| Bra004166.1-P | Field mustard | cytosol | 95.3 | 95.3 |
| CDX96148 | Canola | cytosol | 95.3 | 95.3 |
| GSMUA_Achr11P... | Banana | cytosol | 65.1 | 95.1 |
| CDY27651 | Canola | cytosol | 94.63 | 94.0 |
| CDX99690 | Canola | cytosol | 93.96 | 93.96 |
| PGSC0003DMT400083971 | Potato | extracellular | 91.95 | 91.95 |
| AT2G41110.2 | Thale cress | cytosol | 97.99 | 90.68 |
| AT1G66410.2 | Thale cress | cytosol | 95.97 | 89.94 |
| KRH18664 | Soybean | cytosol | 83.89 | 89.29 |
| TraesCS3A01G184500.1 | Wheat | cytosol | 97.32 | 88.41 |
| TraesCS3D01G188600.1 | Wheat | cytosol | 97.99 | 87.43 |
| Zm00001d038545_P001 | Maize | cytosol, mitochondrion | 85.91 | 85.91 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 69.8 | 85.25 |
| Zm00001d047597_P001 | Maize | cytosol | 83.89 | 85.03 |
| TraesCS2B01G113800.2 | Wheat | cytosol | 97.99 | 83.43 |
| TraesCS3B01G219900.1 | Wheat | cytosol | 97.32 | 83.33 |
| Bra034317.1-P | Field mustard | cytosol | 98.66 | 82.12 |
| CDY48191 | Canola | cytosol | 98.66 | 82.12 |
| AT5G37780.3 | Thale cress | cytosol | 95.97 | 81.71 |
| CDX77060 | Canola | cytosol | 98.66 | 81.67 |
| AT2G27030.3 | Thale cress | cytosol | 97.99 | 80.66 |
| CDX75970 | Canola | cytosol | 61.07 | 79.82 |
| PGSC0003DMT400042062 | Potato | cytosol | 79.19 | 78.67 |
| TraesCS3A01G191900.1 | Wheat | cytosol | 83.89 | 78.62 |
| TraesCS3D01G194500.2 | Wheat | cytosol | 83.89 | 78.62 |
| TraesCS3A01G335000.1 | Wheat | cytosol | 93.96 | 76.92 |
| TraesCS3D01G328300.1 | Wheat | cytosol | 93.96 | 76.92 |
| HORVU3Hr1G079210.4 | Barley | cytosol | 93.96 | 76.09 |
| Zm00001d038543_P004 | Maize | plastid | 85.91 | 75.74 |
| TraesCS3B01G365900.1 | Wheat | cytosol | 92.62 | 75.41 |
| KRG89812 | Soybean | cytosol, mitochondrion | 83.22 | 75.15 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 85.91 | 73.99 |
| HORVU3Hr1G038010.1 | Barley | cytosol, plastid | 97.99 | 73.37 |
| EES01631 | Sorghum | cytosol | 86.58 | 70.11 |
| CDY30947 | Canola | cytosol | 97.99 | 69.86 |
| Zm00001d043144_P001 | Maize | plasma membrane | 83.89 | 68.31 |
| AT3G43810.2 | Thale cress | cytosol | 97.99 | 68.22 |
| HORVU2Hr1G016740.4 | Barley | cytosol | 97.99 | 67.91 |
| Os01t0810300-01 | Rice | plasma membrane | 84.56 | 67.38 |
| PGSC0003DMT400034833 | Potato | cytosol | 69.13 | 67.32 |
| Zm00001d028948_P001 | Maize | cytosol | 87.25 | 65.99 |
| CDY57144 | Canola | cytosol | 64.43 | 65.75 |
| CDY21220 | Canola | cytosol | 97.32 | 65.61 |
| PGSC0003DMT400083727 | Potato | cytosol | 63.76 | 64.63 |
| TraesCS5D01G068100.1 | Wheat | cytosol | 68.46 | 62.58 |
| GSMUA_Achr10P... | Banana | cytosol | 79.19 | 62.43 |
| GSMUA_Achr10P... | Banana | cytosol | 78.52 | 62.23 |
| Zm00001d041430_P001 | Maize | cytosol | 70.47 | 62.13 |
| TraesCS5A01G057100.1 | Wheat | cytosol | 68.46 | 61.82 |
| EES16322 | Sorghum | cytosol | 72.48 | 61.36 |
| TraesCS5A01G057200.1 | Wheat | cytosol | 67.11 | 61.35 |
| EES09201 | Sorghum | cytosol | 73.83 | 61.11 |
| TraesCS5B01G137100.1 | Wheat | cytosol | 73.83 | 61.11 |
| Os12t0603800-00 | Rice | cytosol | 67.79 | 60.84 |
| TraesCS5D01G068000.1 | Wheat | cytosol | 68.46 | 60.71 |
| HORVU5Hr1G044710.4 | Barley | cytosol | 73.15 | 60.56 |
| TraesCS5A01G139700.1 | Wheat | cytosol | 73.15 | 60.56 |
| TraesCS5D01G153400.1 | Wheat | cytosol | 73.15 | 60.56 |
| HORVU5Hr1G014070.2 | Barley | cytosol | 67.11 | 60.24 |
| TraesCS5B01G059900.1 | Wheat | cytosol | 67.79 | 60.12 |
| Zm00001d005003_P002 | Maize | cytosol | 71.14 | 58.89 |
| Zm00001d052415_P001 | Maize | cytosol | 62.42 | 58.86 |
| AT2G41090.1 | Thale cress | cytosol | 63.09 | 49.21 |
| PGSC0003DMT400070433 | Potato | cytosol | 47.65 | 48.3 |
| HORVU5Hr1G014060.1 | Barley | cytosol, plastid | 67.79 | 47.2 |
| Os05t0491000-01 | Rice | cytosol | 48.32 | 46.45 |
| TraesCS1D01G308000.1 | Wheat | cytosol | 45.64 | 45.33 |
| HORVU0Hr1G001280.1 | Barley | cytosol | 45.64 | 45.03 |
| PGSC0003DMT400008152 | Potato | cytosol | 48.99 | 44.79 |
| TraesCS1A01G308700.1 | Wheat | cytosol | 45.64 | 44.74 |
| TraesCS1B01G319300.1 | Wheat | cytosol | 44.97 | 44.67 |
| TraesCS4B01G131100.1 | Wheat | cytosol | 67.11 | 43.29 |
| Zm00001d010649_P001 | Maize | extracellular | 40.94 | 42.96 |
| TraesCS4D01G126100.1 | Wheat | cytosol | 68.46 | 42.32 |
| HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 62.42 | 42.08 |
| PGSC0003DMT400038352 | Potato | cytosol | 45.64 | 41.72 |
| OQU78227 | Sorghum | cytosol | 48.32 | 40.22 |
| PGSC0003DMT400010295 | Potato | cytosol, mitochondrion | 44.3 | 39.29 |
| PGSC0003DMT400041342 | Potato | cytosol, mitochondrion | 38.93 | 36.02 |
| PGSC0003DMT400063261 | Potato | cytosol | 37.58 | 34.78 |
| PGSC0003DMT400019291 | Potato | cytosol | 24.83 | 31.9 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 45.64 | 27.76 |
| AT2G41100.1 | Thale cress | cytosol | 59.06 | 27.16 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:102577873 | PDB:1RFJ | MapMan:35.1 | ProteinID:AAA62351 | ProteinID:AAA62351.1 |
| ProteinID:AAA85152 | ProteinID:AAA85152.1 | ProteinID:AAA85153 | ProteinID:AAA85153.1 | ProteinID:AAA85154 | ProteinID:AAA85154.1 |
| ProteinID:AAA85155 | ProteinID:AAA85155.1 | ProteinID:AAA85156 | ProteinID:AAA85156.1 | ProteinID:AAA85157 | ProteinID:AAA85157.1 |
| ProteinID:ABA40458 | ProteinID:ABA40458.1 | ProteinID:ABA46768 | ProteinID:ABA46768.1 | EMBL:DQ191657 | EMBL:DQ200375 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_001275359.1 | PFAM:PF13499 | EnsemblPlantsGene:PGSC0003DMG400022693 | PGSC:PGSC0003DMG400022693 |
| EnsemblPlants:PGSC0003DMT400058435 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF250 | UniProt:Q3HVL6 |
| UniProt:Q7DMN9 | SMART:SM00054 | SUPFAM:SSF47473 | EMBL:U20291 | EMBL:U20292 | EMBL:U20293 |
| EMBL:U20294 | EMBL:U20295 | EMBL:U20296 | EMBL:U20297 | UniParc:UPI00000AB675 | : |
Description
PCM6Calmodulin 5/6/7/8-like protein [Source:UniProtKB/TrEMBL;Acc:Q3HVL6]
Coordinates
chr1:-:5358830..5361994
Molecular Weight (calculated)
16848.6 Da
IEP (calculated)
3.876
GRAVY (calculated)
-0.619
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLTEDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYD EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYD EFVKVMMAK
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
Arabidopsis Description
CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.