Factsheet for PGSC0003DMT400065492

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400034833
PGSC0003DMT400042062
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50310.1	PGSC0003DMT400014123	AT2G41090.1	17360592
AT3G50310.1	PGSC0003DMT400018569	AT2G41090.1	17360592
AT3G50310.1	PGSC0003DMT400046278	AT2G41090.1	17360592
AT3G50310.1	PGSC0003DMT400054299	AT2G41090.1	17360592
AT3G50310.1	PGSC0003DMT400058435	AT2G41090.1	17360592
AT3G50310.1	PGSC0003DMT400070437	AT2G41090.1	17360592
AT3G50310.1	PGSC0003DMT400097662	AT2G41090.1	17360592
AT3G50310.1	PGSC0003DMT400034833	AT4G14640.1	17360592
AT3G50310.1	PGSC0003DMT400042062	AT4G14640.1	17360592
AT3G50310.1	PGSC0003DMT400014123	AT5G21274.1	17360592
AT3G50310.1	PGSC0003DMT400018569	AT5G21274.1	17360592
AT3G50310.1	PGSC0003DMT400046278	AT5G21274.1	17360592
AT3G50310.1	PGSC0003DMT400054299	AT5G21274.1	17360592
AT3G50310.1	PGSC0003DMT400058435	AT5G21274.1	17360592
AT3G50310.1	PGSC0003DMT400070437	AT5G21274.1	17360592
AT3G50310.1	PGSC0003DMT400097662	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g064980.1.1	Tomato	cytosol	91.57	90.81
PGSC0003DMT400010342	Potato	cytosol, plastid	68.82	68.06
PGSC0003DMT400010341	Potato	cytosol	66.29	66.29
PGSC0003DMT400010340	Potato	nucleus	66.57	65.83
AT4G36950.1	Thale cress	plastid	49.44	52.38
CDX83120	Canola	cytosol	48.88	51.33
Bra030001.1-P	Field mustard	cytosol	48.88	51.33
Bra036070.1-P	Field mustard	cytosol	49.16	51.17
CDY17760	Canola	cytosol	49.16	51.17
CDY30595	Canola	cytosol	49.16	51.17
KRH04602	Soybean	nucleus	48.6	50.73
AT3G50310.1	Thale cress	cytosol	47.75	49.71
AT5G67080.1	Thale cress	cytosol	47.75	49.42
KRH57939	Soybean	nucleus	47.19	49.27
KRH28449	Soybean	plastid	36.52	49.06
KRH66431	Soybean	plastid	47.47	48.56
KRH28462	Soybean	plastid	47.19	48.55
CDX75628	Canola	plastid	47.75	48.02
Bra012131.1-P	Field mustard	cytosol	46.63	47.98
CDY12801	Canola	cytosol	46.63	47.98
CDY01441	Canola	cytosol	46.63	47.98
KRH74789	Soybean	nucleus	44.1	47.87
Bra011739.1-P	Field mustard	plastid	47.47	47.74
CDX69280	Canola	plastid	46.91	47.31
KRH77009	Soybean	nucleus	45.79	47.11
VIT_07s0031g00530.t01	Wine grape	mitochondrion	45.79	44.17
PGSC0003DMT400044025	Potato	mitochondrion	37.08	43.85
PGSC0003DMT400044024	Potato	mitochondrion	36.8	43.52
PGSC0003DMT400083928	Potato	cytosol	22.75	40.3
PGSC0003DMT400068616	Potato	cytosol, mitochondrion	19.38	40.12
KRH66433	Soybean	cytosol, plastid	38.76	39.88
PGSC0003DMT400090482	Potato	extracellular, mitochondrion, plasma membrane, plastid	19.94	39.23
PGSC0003DMT400024024	Potato	cytosol	17.7	39.13
PGSC0003DMT400052710	Potato	mitochondrion, plastid	33.43	37.66
PGSC0003DMT400052743	Potato	cytosol	34.55	37.27
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	41.29	37.03
PGSC0003DMT400052693	Potato	cytosol	34.27	36.97
PGSC0003DMT400067115	Potato	mitochondrion	30.06	36.9
PGSC0003DMT400075969	Potato	golgi, mitochondrion	33.43	36.62
PGSC0003DMT400067198	Potato	mitochondrion	32.02	36.42
PGSC0003DMT400038860	Potato	cytosol	33.99	36.23
PGSC0003DMT400038864	Potato	extracellular	33.99	36.01
PGSC0003DMT400038863	Potato	cytosol, mitochondrion, plastid	33.15	35.33
PGSC0003DMT400090575	Potato	cytosol	32.3	35.17
PGSC0003DMT400036857	Potato	mitochondrion	39.89	35.06
PGSC0003DMT400052702	Potato	mitochondrion	33.43	35.0
PGSC0003DMT400038374	Potato	cytosol, mitochondrion, plasma membrane, plastid	27.53	34.88
PGSC0003DMT400090653	Potato	cytosol	27.25	34.52
PGSC0003DMT400067126	Potato	mitochondrion	34.27	34.17
PGSC0003DMT400092406	Potato	cytosol	33.43	34.0
PGSC0003DMT400072002	Potato	mitochondrion	33.15	33.91
PGSC0003DMT400090976	Potato	mitochondrion	32.02	33.83
GSMUA_Achr4P13370_001	Banana	cytosol	44.38	33.4
PGSC0003DMT400064172	Potato	cytosol	32.58	32.68
PGSC0003DMT400024020	Potato	cytosol	26.12	32.4
PGSC0003DMT400067129	Potato	mitochondrion	21.91	31.84
PGSC0003DMT400067237	Potato	cytosol	25.28	30.93
PGSC0003DMT400073303	Potato	nucleus	37.08	30.56
PGSC0003DMT400038861	Potato	plastid	32.3	30.34
PGSC0003DMT400076066	Potato	mitochondrion	19.94	30.34
PGSC0003DMT400088687	Potato	cytosol	16.57	29.35
PGSC0003DMT400092021	Potato	cytosol	15.73	28.28
PGSC0003DMT400057171	Potato	plastid	31.74	24.62
PGSC0003DMT400063858	Potato	cytosol	23.88	20.48
PGSC0003DMT400073788	Potato	nucleus	26.12	15.15
PGSC0003DMT400023236	Potato	cytosol	28.65	14.83
PGSC0003DMT400026093	Potato	nucleus, plastid	25.84	14.35
PGSC0003DMT400001980	Potato	nucleus, plastid	25.28	14.31
PGSC0003DMT400061014	Potato	mitochondrion	26.12	13.96
PGSC0003DMT400039936	Potato	plastid	26.4	13.74
PGSC0003DMT400020760	Potato	plastid	26.97	13.54
PGSC0003DMT400031805	Potato	cytosol	28.65	11.67
PGSC0003DMT400040869	Potato	cytosol	28.09	11.24
PGSC0003DMT400019785	Potato	plastid	2.81	1.48

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102590361	MapMan:18.4.2.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CE33	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400025472	PGSC:PGSC0003DMG400025472
EnsemblPlants:PGSC0003DMT400065492	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000294AEA4	RefSeq:XP_006360216.1	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400025472]

Coordinates

chr2:-:23491685..23493155

Molecular Weight (calculated)

39395.0 Da

IEP (calculated)

4.645

GRAVY (calculated)

-0.208

Length

356 amino acids

Sequence
(BLAST)

001: MDWVRGEAVG HGSFGKVNLA IPRKQSTQFL PLMVMKSSGV SHSVSLVNEK KILDELNGCS EIIRCFGESY SFENGDSLYN LLLEYATGGS LAEKLKKSEN
101: YKLSEFEVSG YTKGILKGLQ YVHEVGYAHC DIKLQNILLG EDGKVKIADF GLAKRVGIKK DDELRCELRG TPLYMSPEMV TGGEQGTPAD IWALGCVVAE
201: MVAGVPAYRF SNVTELLMAI GVKNQLPQIP EELSEEGKDF LSKCFVQDPR KRWTAEMLLK HPFVADHDTL TLLNEEIKNG VPSISPKCPF DFPDWVSDEC
301: AQSSVTCSIT FLPSPENLNS SCGCWSTSPA ERLMGLVSEF STESEWCSDD DWVTVR

Best Arabidopsis Sequence Match ( AT4G36950.1 )
(BLAST)

001: MEWIRRETIG HGSFSTVSLA TTSGSSSKAF PSLMAVKSSG VVCSAALRNE RDVLDDLGDC SEIVRCFGEG RTVENGEEIY NLFLEYASGG SLADRIKSSG
101: EALPEFEVRR FTRSIVKGLC HIHGNGFTHC DIKLENVLVF GDGDVKISDF GLAKRRSGEV CVEIRGTPLY MAPESVNHGE FESPADIWAL GCSVVEMSSG
201: KTAWCLEDGV MNNVMSLLVR IGSGDEVPRI PVELSEEGKD FVSKCFVKNA AERWTAEMLL DHPFLAVDDE SGEEDEACSV SPRNPFDFPG WNSVQSPVND
301: SVMFGSLVGS PEERISGLVS EKVPDWSVSC DWVNVR

Arabidopsis Description

MAPKKK21Mitogen-activated protein kinase kinase kinase 21 [Source:UniProtKB/TrEMBL;Acc:Q6K1M3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.