CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50310.1	KRG89812	AT2G41090.1	17360592
AT3G50310.1	KRG94975	AT2G41090.1	17360592
AT3G50310.1	KRH18664	AT2G41090.1	17360592
AT3G50310.1	KRH31638	AT4G14640.1	17360592
AT3G50310.1	KRH69070	AT4G14640.1	17360592
AT3G50310.1	KRG89812	AT5G21274.1	17360592
AT3G50310.1	KRG94975	AT5G21274.1	17360592
AT3G50310.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66433	Soybean	cytosol, plastid	94.72	72.54
KRH28462	Soybean	plastid	68.68	52.6
KRH66431	Soybean	plastid	69.06	52.59
KRH77009	Soybean	nucleus	68.3	52.31
KRH74789	Soybean	nucleus	64.15	51.83
KRH57939	Soybean	nucleus	57.36	44.57
KRH04602	Soybean	nucleus	56.23	43.7
CDY12801	Canola	cytosol	53.96	41.33
Bra030001.1-P	Field mustard	cytosol	52.08	40.71
CDX83120	Canola	cytosol	52.08	40.71
AT4G36950.1	Thale cress	plastid	51.32	40.48
Bra012131.1-P	Field mustard	cytosol	52.83	40.46
CDY01441	Canola	cytosol	52.83	40.46
AT5G67080.1	Thale cress	cytosol	52.08	40.12
CDY17760	Canola	cytosol	51.7	40.06
CDY30595	Canola	cytosol	51.7	40.06
AT3G50310.1	Thale cress	cytosol	51.7	40.06
Bra036070.1-P	Field mustard	cytosol	51.7	40.06
KRH55299	Soybean	mitochondrion	35.09	37.65
PGSC0003DMT400010342	Potato	cytosol, plastid	50.94	37.5
KRH55037	Soybean	plasma membrane	42.26	37.33
CDX75628	Canola	plastid	49.81	37.29
Bra011739.1-P	Field mustard	plastid	49.81	37.29
KRH55302	Soybean	plasma membrane, plastid	41.51	37.29
PGSC0003DMT400010340	Potato	nucleus	50.57	37.22
Solyc02g090990.1.1	Tomato	cytosol	49.81	37.08
Solyc02g090980.1.1	Tomato	cytosol	49.43	36.9
CDX69280	Canola	plastid	49.06	36.83
Solyc02g090970.1.1	Tomato	cytosol, nucleus, plasma membrane, plastid	49.81	36.67
PGSC0003DMT400065492	Potato	nucleus	49.06	36.52
Solyc02g064980.1.1	Tomato	cytosol	49.43	36.49
PGSC0003DMT400010341	Potato	cytosol	48.68	36.24
KRH00952	Soybean	cytosol	39.62	36.21
VIT_07s0031g00530.t01	Wine grape	mitochondrion	47.17	33.88
GSMUA_Achr9P21940_001	Banana	cytosol, mitochondrion, peroxisome, plastid	48.68	32.49
KRH25356	Soybean	cytosol	41.13	30.97
KRH06039	Soybean	cytosol	38.87	30.65
KRH26278	Soybean	cytosol	37.74	30.4
KRH56159	Soybean	cytosol, mitochondrion, plastid	40.38	27.79
GSMUA_Achr4P13370_001	Banana	cytosol	46.79	26.22
KRH36483	Soybean	cytosol, mitochondrion, plasma membrane, plastid	40.75	25.59
KRH26765	Soybean	mitochondrion	36.6	24.49
KRH22583	Soybean	plastid	36.23	24.12
KRG98260	Soybean	mitochondrion	34.72	23.77
KRH30249	Soybean	mitochondrion	34.34	22.14
KRH10459	Soybean	cytosol	34.72	20.91
KRH72707	Soybean	mitochondrion	35.85	20.39
KRH42244	Soybean	cytosol	33.58	18.94
KRH17058	Soybean	cytosol, golgi, mitochondrion, nucleus, plastid	34.72	18.89
KRH58364	Soybean	cytosol, plastid	33.96	18.0
KRH53173	Soybean	nucleus	34.34	16.4
KRH05734	Soybean	cytosol, plastid	34.34	16.02
KRH64042	Soybean	nucleus	36.23	15.97
KRH64744	Soybean	nucleus	33.96	15.9
KRH43554	Soybean	nucleus	35.47	15.77
KRH59572	Soybean	nucleus	35.47	15.67
KRH16614	Soybean	mitochondrion	32.45	15.55
KRH53896	Soybean	nucleus	35.47	15.26
KRH10458	Soybean	cytosol	27.17	15.25
KRH28506	Soybean	plastid	35.85	15.25
KRH76953	Soybean	plastid	35.85	15.01
KRH16616	Soybean	nucleus	33.21	14.92
KRH35566	Soybean	nucleus	34.72	14.74
KRH18819	Soybean	nucleus	32.83	14.65
KRG91247	Soybean	nucleus	34.34	14.51
KRG96833	Soybean	cytosol	35.85	14.44
KRH68552	Soybean	cytosol	35.85	14.35
KRH57740	Soybean	plastid	33.96	14.2
KRH04666	Soybean	plastid	33.96	14.13
KRH61238	Soybean	cytosol, plastid	31.7	12.82
KRH15298	Soybean	cytosol	33.96	12.82
KRH51939	Soybean	mitochondrion, plastid	31.7	12.52
KRG91565	Soybean	cytosol	36.98	11.04
KRH35266	Soybean	nucleus	36.6	10.94
KRH38416	Soybean	cytosol, plastid	36.6	10.81
KRH08892	Soybean	cytosol	36.6	10.8
KRH27916	Soybean	cytosol, plastid	33.96	10.66
KRH77558	Soybean	cytosol, plastid	33.96	10.36
KRH41200	Soybean	cytosol	33.96	8.67
KRH24194	Soybean	cytosol	30.94	5.94
KRH29165	Soybean	cytosol	30.94	5.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	UniProt:A0A0R0HCL7	EMBL:ACUP02006752	EnsemblPlantsGene:GLYMA_11G054400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0023014
GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719	EnsemblPlants:KRH28449	ProteinID:KRH28449	ProteinID:KRH28449.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361
PANTHER:PTHR24361:SF334	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0006EDA04A	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:4100073..4102419

Molecular Weight (calculated)

29542.5 Da

IEP (calculated)

8.743

GRAVY (calculated)

-0.387

Length

265 amino acids

Sequence
(BLAST)

001: MSSSSMKKNW VRGESLGSGS SATVNIAIPT NPSTHNFPSP TAVKSSLFLT SYSLKTEKDV LDILGPSPNI IKCYGNDCTV ENGKRYYNVF LEYAAGGSLA
101: DQLRKYGGRF PEAYVRRRTK SILEGLKHIH SKGYVHCDVK PQNILVFDNG VVKIADLGLA KRRGEINREY VCRGTPMYMS PESLTDNVYE SPVDIWALGC
201: TIVEMITGEH AGEELPEIPQ ELSQGKDFLD KCLVKDPNKR WTAHMLLNHP FIKNPLPQPL PRKIV

Best Arabidopsis Sequence Match ( AT3G50310.1 )
(BLAST)

001: MEWVRGETIG FGTFSTVSTA TKSRNSGDFP ALIAVKSTDA YGAASLSNEK SVLDSLGDCP EIIRCYGEDS TVENGEEMHN LLLEYASRGS LASYMKKLGG
101: EGLPESTVRR HTGSVLRGLR HIHAKGFAHC DIKLANILLF NDGSVKIADF GLAMRVDGDL TALRKSVEIR GTPLYMAPEC VNDNEYGSAA DVWALGCAVV
201: EMFSGKTAWS VKEGSHFMSL LIRIGVGDEL PKIPEMLSEE GKDFLSKCFV KDPAKRWTAE MLLNHSFVTI DLEDDHRENF VVKVKDEDKV LMSPKCPFEF
301: DDWDSFTLDS NPSFDSPVER LGSLVSGSIP DWSVGGSWLT VR

Arabidopsis Description

MAPKKK20MKKK20 [Source:UniProtKB/TrEMBL;Acc:A0A178VGW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.